Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag1032 | ATGAATTCCCCTGAAACTGAGAAGACAACTACTTCCGCCTCCATTTCCCTTACCAACACTAGCGCCGCCATATCCATAGGGTCTCCGCAAGTTCTAGAATCACCTTTATCCTGTTACATAAGTAACCTATCGCCAATTAAGCCAGCCAAGGGTCTACTTATAGGCGAAGGGTTTACTGCACTTAGTTCTCCTCCACTTGTATTTTCTTCACCACATGTGAATTCAAACCATGAGACAAGCTTCGTGAAGAGGGCTCAGTATACTGATTCACCTAGTGCATTAGTCTCTACGAACAATGCTGCAGGAGAGAAATCCGTTGATGGTTTAGATGATTCTGAGAACTGTGCGAGACAGTTATGTAGGAGATTGGTTACTGGCTTCCAGGAATCTGATGATAAGATTGCTGAGCAATCACCCTGCGGTTCTTCTGAATTTCTTGACAATTTCTTGGCTGATTCTGATGATGTGGATAGTTGTAACTCTATGCATGCTGTCAGTCCACATTTAAAACAATCTAATGATGGACTGCCTGAATCATCACAAAGTGTATTGAATGCTATAGTTAAAGAGCCGGAAGAGCCGTTGTTGCTGTCAAACAAAGTCGAAAAAGGCAATCAGGAAAATGCAGTATTTGATTGCTACCATGTCAGAGGAGAAAAGCAACAAAAGGGTGATGACTATCCATCCCCCGAGTTCAATGATACTGAGTCTGATTTTTCCAATAGATATGCTTGTGATAAACAACAAAATGAAGATTCATGTGCTCAGGATGCTTGGGCATTCCCCCAAAATGACTTTCAGTGTACTCCACAATCGGAACCTCAACCTCTAGAGATTTTCAATGCATGTGAATTTGGTGAAGAGAATGCTGGAGAGGTCTCTAATAGTCTTTCTGAGTACAGTAATTGCAAACAGTTATCACAGGTCCGTCAAAATCAACGTGGCATGCATCGACGTTACCTTCAGTTTGAAGAGGTTGCCTTAAATGCTATTGGAAACAGATCCCATTCTTCTAATCTGACAGGTAATAATATCAAGTCAACATTACTATCCATGAATGTAACAAATGAGAGTCAAAAGTCATCTGGGATGTATTCAAATCCAAATTCTGTAAAACAAAATCCAGTTAGCTTGTCCCAGCCTGTGGCTGCTTTGTTACCTCCATGCTCCAAGCCTTTAGGTATTGGTTTGCATCTAAATAGCATTGTCAGTGGTATGCCAACGGGTTCCAGTTCAGTTGCAAGCATAAAATTAGCAGAAGATTATAACAGCTTTCAGGGTGTGGAGACAGTGGTAAAGAGTAGTCATCTGCGAAGCAGAAACACCTACATTGAAAATTCTTCACACTGTGGTGAAGATGAGATGCATGAAAGAAACACCTCAATAATGGCAGGTTCTACCACTTCTGAGTTTTACAGTGCCATGGAACCTTTAACTGTGCCAAACCATGCTGGATGTCAGGCAACTCTAGATGGGACAGAGAAGTTTATCTCAGGACACATTGATAATCTGGAAGAGTTCAATAAACCGAGCCCCAAAAAGAAAAGGATTAAAACTGATGGTGATGGTTTCAAAGGTTGTAACTGTAAGAAGACAAAATGCTTGAAACTTTATTGTGACTGCTTTGCTGCTGGGGTCTATTGTGGCGATGCTTGTGCTTGCCAGGGATGCTTTAATAGACTGGAGAATGAAGAAATGGTTCATGAAACACGCCACCAAATTGAATCACGAAATCCTCTGGCATTTGCCCCGAAAATTGTGCCACGCCTCACTGAGATTCCTCTGAAAAAAGTGGATGGAACTCAAACAACTCCATCATTGGCAAGGCATAAAAGAGGGTGCAATTGCAAAAAATCCATGTGTCTTAAAAAATACTGTGAATGCTATCAGGCTAATGTTGGATGCTCTAGTGGATGCCGTTGTGAGGGATGTAAAAACGTCTATGGCAGAACAGAAGAATATGTTGCAACAATGCATGGATCAGAAGGGACTCTCAATGAGAATCTTGAAATGGTAGCAACTGTGAAAGATTTCTCACATGCTGAAATTCATGGCCTTACACCCGTGACACCTTCTTTTCAATACTCAGACCATGGAATGGATGCACAAAGACCACACCCTGTTTCTCGAAGATGTCTCCCTTCACCCGACTCTGATCTTATATCTTATGCCAACTCCACTTCCTCCCCTAAGAACTCGGACAATGACAACATGCTTCTGGAAGAAAAGAATGACTCGCTGGACTCTGGCTATTACACATGGCAGATAAGTTATGACAATGTTGACATGGCGGATCCAGATCATACCTCACCAAGATCAAACGACATCCCTAGCTTATATCAGCTTACTCCCCTACAACATCACCCCTCAATGAATACTATGGCCTCATCTACAGCGTCCAAGTCAAAGGACTGGTCAAACATGTCTCATAGTCAACCCTTCTCAACTGGTGGGTCCCTTAGACGACTTACTCCACCAATCACACCCTTAACCCGGTTAGGTGCAACTAAGTCTTTCAAACATGTGGGCCCTCAAACCGAAGAAGATGATACACCTGAGATACTGAAAGACAATACTAAGTCCCCGATTCAATCTGTGAAAGTAAGCTCTCCAAATAAGAAGCGGGTTTCTCCTCCCTATTGCCATGTGCTTGAGCATGGATCGAACTCTATGGGATCTTTGAAAAGTGGGCGCAAGTTTATACTGAAGGCAGTACCTTCTTTTCCACCTCTTACTCCTTGCATTGATTCCACAGGCGGCTCTGGTGCAAATCGAAGTGAATGTGCGGATAATAGTGGTGGCAGCAAGTGA | 2811 | 42.62 | MNSPETEKTTTSASISLTNTSAAISIGSPQVLESPLSCYISNLSPIKPAKGLLIGEGFTALSSPPLVFSSPHVNSNHETSFVKRAQYTDSPSALVSTNNAAGEKSVDGLDDSENCARQLCRRLVTGFQESDDKIAEQSPCGSSEFLDNFLADSDDVDSCNSMHAVSPHLKQSNDGLPESSQSVLNAIVKEPEEPLLLSNKVEKGNQENAVFDCYHVRGEKQQKGDDYPSPEFNDTESDFSNRYACDKQQNEDSCAQDAWAFPQNDFQCTPQSEPQPLEIFNACEFGEENAGEVSNSLSEYSNCKQLSQVRQNQRGMHRRYLQFEEVALNAIGNRSHSSNLTGNNIKSTLLSMNVTNESQKSSGMYSNPNSVKQNPVSLSQPVAALLPPCSKPLGIGLHLNSIVSGMPTGSSSVASIKLAEDYNSFQGVETVVKSSHLRSRNTYIENSSHCGEDEMHERNTSIMAGSTTSEFYSAMEPLTVPNHAGCQATLDGTEKFISGHIDNLEEFNKPSPKKKRIKTDGDGFKGCNCKKTKCLKLYCDCFAAGVYCGDACACQGCFNRLENEEMVHETRHQIESRNPLAFAPKIVPRLTEIPLKKVDGTQTTPSLARHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCEGCKNVYGRTEEYVATMHGSEGTLNENLEMVATVKDFSHAEIHGLTPVTPSFQYSDHGMDAQRPHPVSRRCLPSPDSDLISYANSTSSPKNSDNDNMLLEEKNDSLDSGYYTWQISYDNVDMADPDHTSPRSNDIPSLYQLTPLQHHPSMNTMASSTASKSKDWSNMSHSQPFSTGGSLRRLTPPITPLTRLGATKSFKHVGPQTEEDDTPEILKDNTKSPIQSVKVSSPNKKRVSPPYCHVLEHGSNSMGSLKSGRKFILKAVPSFPPLTPCIDSTGGSGANRSECADNSGGSK | 936 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 7825791 | 7830179 | + | Conep17aG0106000.1 | Cone17ag1032 | 456509 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag1032 | 936 | SMART | CXC_2 | 609 | 650 | IPR033467 | - | |
Cone17ag1032 | 936 | SMART | CXC_2 | 522 | 563 | IPR033467 | - | |
Cone17ag1032 | 936 | MobiDBLite | consensus disorder prediction | 695 | 714 | - | - | |
Cone17ag1032 | 936 | MobiDBLite | consensus disorder prediction | 719 | 735 | - | - | |
Cone17ag1032 | 936 | MobiDBLite | consensus disorder prediction | 914 | 936 | - | - | |
Cone17ag1032 | 936 | ProSiteProfiles | CRC domain profile. | 523 | 649 | IPR005172 | - | |
Cone17ag1032 | 936 | MobiDBLite | consensus disorder prediction | 917 | 936 | - | - | |
Cone17ag1032 | 936 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 611 | 646 | IPR005172 | - | |
Cone17ag1032 | 936 | Pfam | Tesmin/TSO1-like CXC domain, cysteine-rich domain | 525 | 560 | IPR005172 | - | |
Cone17ag1032 | 936 | MobiDBLite | consensus disorder prediction | 842 | 856 | - | - | |
Cone17ag1032 | 936 | MobiDBLite | consensus disorder prediction | 719 | 739 | - | - | |
Cone17ag1032 | 936 | PANTHER | PROTEIN TESMIN/TSO1-LIKE CXC 2 | 19 | 915 | IPR044522 | GO:0003700(InterPro) | |
Cone17ag1032 | 936 | MobiDBLite | consensus disorder prediction | 790 | 822 | - | - | |
Cone17ag1032 | 936 | MobiDBLite | consensus disorder prediction | 790 | 879 | - | - | |
Cone17ag1032 | 936 | MobiDBLite | consensus disorder prediction | 857 | 872 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag1032 | Cone-Chr17:7825791 | Cone7ag0270 | Cone-Chr7:1123293 | 5.50E-54 | dispersed | |
Cone17ag1032 | Cone-Chr17:7825791 | Cone20ag0663 | Cone-Chr20:4043960 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45081 | PF00011 | HSP20 | 2.40E-22 | CL0190 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag1032 | K21776 | - | vvi:100261127 | 662.144 |