Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1040 ATGCAACACATGAAAACTCCCTTCAAGGGGGTAATCAAAGATTTTAAAGGAAGAGCAGCGTGCTATAAGCAGGATTGGATTTGTACACCTAGTTCGGGATTCAGGATTTTGGCTCCTACTATGTATATCTTCTTTGCTTCTGCTCTTCCTGTTATTGCCTTTGGAGAGCAGTTAAGTAGGGAGACAGATGGAAGCTTGAGCCCGGTCGAAACATTAGCTTCAACTGCTCTCTGTGGAATCATTCACTCAATCTTTGGGGGACAACCATTGTTGATTTTGGGAGTTGCAGAACCCACAGTTATCATGTACAGTTTCTTGTACAGTTTCAGCAAAACAAGGCCGGGGATAGGGCCCAAGCTCTATTTGGCATGGGTTGGTTGGGTTTGTGTTTGGACGGCACTTCTCCTCATTCTTCTCGCAATATTCAACGCATGCACCATCATCACCAAATTCACAAGGGTTGCAGGGGAGCTTTTTGGCATGTTGATTGCTGTTCTTTTCGTTCAACAGGCTATAAAGGGAGTGCTCAGTGAATTCACAATCCCAAAAGCTGAAAATCCAGATGCTGAAAAGTACCAGTTCCAATGGTTGTATGCAAATGGGCTGCTAGCAGTTATTTTTACTTTTGGTGTACTTCTGACTTCTCGAAAAAGTAGAAAAGCTAGATCTTGGCGATATGGCATGGGATGGTTTCGAAGTTTCATCGCAGACTATGGGGTTCCCCTTATGGTCTTGGTCTGGTCAGCAATGTCTTTTGGAGTACCCAATAAAGTTCCAGATGGCGTTCCAAGGAGACTCTTCTGCCCACTTCCATGGGAGTCTGCGTCAGTGTACCACTGGACAGTTATGAAGGATATGGGAAAGGTTCCAGTGGCGTGCGTCTTTGCCGCCTTCATACCAGCCGTGATGGTAGCGGGGCTTTATTTTTTTGATCACAGCGTAGCTTCACAATTGGCCCAACAGAAGGAGTTCAATCTTCAAAAACCATCTGCATACCATTATGATATCCTCTTGCTTGGAATTATGACTCTGACTTGTGGGTTGCTTGGACTTCCTCCTTCTAATGGTGTCCTCCCGCAGTCCCCAATGCACACCAAGAGCCTGGCTGTTCTCAGAAGGCAGTTGATCAGAAATAAAATGTTAAAGAGTGCCAAGGAATGCATCAAAGAAAATGCAAGCAACCACGAAATGTATGGAAAGATGGAAGCCGTGTTCATTGCTATGGACACATCTCCAACGCCTAAAGAATTGGAGGTCATGAAGGATGCTGTACTAAAATCCGATCACGAGGGCGGAACAGAAAAGGGAAAATTTGATCCAGAGAAGCACATAGATGGTTTCTTACCTGTTCGTGTGAACGAGCAGAGGATTAGCAACCTTTTGCAATCCCTTCTTGTGGGACTATCAATATGTGGTATACCCCTATTAAAAAAAATCCCCACCTCTGTTCTGTGGGGTTATTTTGCTTACATGGCCTTTGATAGCCTCCCCGGAAATCAGTTCTGGGACAGAATGATGCTCCTCTTCATCACACCAAGTCGGCGTTTCAAGGTTTTGGAAGGTTCCCATGCATCATTCGTGGAATCTGTACCGTTCAAGCTCATTACCATGTTTACCCTTCTACAATTTGTATATTTTCTGCTGTGTTATGGGATTACATGGATACCTGTAGCTGGCATACTCTTCCCTCTTCCATTTTTCCTTCTCATAAGTATAAGACAGTATATTCTTCCCAAAATTTTCCCACATCATTATCTTAAGGAACTCGATGCTTCCGAGTACGAGGAAATTGCTGGTGCTCCACAACGGAGTATCTCAATGGAGAGAGAACCACCTGCTGACGGTAATAGTAATGAGATTGCTGAAGATTACTATGATGCTGAGTTATTAGATGAAATGACAACTCACAGAGGAGAGTTGAAACTTAGAACTATCACGGACGAAAAATTATTTCAGGTTTATCCCGGAGACGATTCCGACCGGGTACAGTGA 1992 44.08 MQHMKTPFKGVIKDFKGRAACYKQDWICTPSSGFRILAPTMYIFFASALPVIAFGEQLSRETDGSLSPVETLASTALCGIIHSIFGGQPLLILGVAEPTVIMYSFLYSFSKTRPGIGPKLYLAWVGWVCVWTALLLILLAIFNACTIITKFTRVAGELFGMLIAVLFVQQAIKGVLSEFTIPKAENPDAEKYQFQWLYANGLLAVIFTFGVLLTSRKSRKARSWRYGMGWFRSFIADYGVPLMVLVWSAMSFGVPNKVPDGVPRRLFCPLPWESASVYHWTVMKDMGKVPVACVFAAFIPAVMVAGLYFFDHSVASQLAQQKEFNLQKPSAYHYDILLLGIMTLTCGLLGLPPSNGVLPQSPMHTKSLAVLRRQLIRNKMLKSAKECIKENASNHEMYGKMEAVFIAMDTSPTPKELEVMKDAVLKSDHEGGTEKGKFDPEKHIDGFLPVRVNEQRISNLLQSLLVGLSICGIPLLKKIPTSVLWGYFAYMAFDSLPGNQFWDRMMLLFITPSRRFKVLEGSHASFVESVPFKLITMFTLLQFVYFLLCYGITWIPVAGILFPLPFFLLISIRQYILPKIFPHHYLKELDASEYEEIAGAPQRSISMEREPPADGNSNEIAEDYYDAELLDEMTTHRGELKLRTITDEKLFQVYPGDDSDRVQ 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 7855980 7859283 + Conep17aG0106800.1 Cone17ag1040 456517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1040 663 Pfam HCO3- transporter integral membrane domain 7 181 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone17ag1040 663 Pfam HCO3- transporter integral membrane domain 200 374 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone17ag1040 663 Pfam HCO3- transporter integral membrane domain 450 592 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone17ag1040 663 PANTHER ANION EXCHANGE PROTEIN 4 634 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Cone17ag1040 663 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1040 Cone-Chr17:7855980 Cone18ag0762 Cone-Chr18:4291387 9.44E-269 dispersed
Cone17ag1040 Cone-Chr17:7855980 Cone20ag0659 Cone-Chr20:4008887 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1040 K24194 - csv:101220188 998.808