Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1082 ATGGCGGCATCGCCATCTGGGAATAACGAGAAGAGCATTGAGAATTTAGTGTCTGCTAGGAAGGCATTGAAGCTTAACTTGGATAAATCTAAGGCTCTAGGGTTAGCACTAGCAAAATCAGGGCCTAGATTGGAAGAGATTAGCCACAGATTACCTTCTCTCGGAGCGGCTGTACGGCCCATTCGTGCTGACAAGGAAGCCCTTGTTGCAGTGGGAGGTCACATTAACCGTGCGGTTGGCCCGGCTGCAGCAGTGCTTAAGGTGTTTGAGGCTGTTCACGGGCTCGAGAAGTCATTACTGTCGGACCCACGAAATGATCTCCCTGGTTACTTATCGGTCCTGAAACGCCTGGAAGAGGCGTTGAATTTTTTGGGGGATAATTGTGGATTAGCAATTCAATGGTTGGAGGATATAGTTGAGTATTTGGATGATAATACAGTTGCCGATGATCAGTACATTGCGAATCTGAAAATGTCATTGAAAAATCTTCGAGAATTGCAAAGTAATGAAGAAAGAACTCATCTTGATGGAGGGCTTTTGGATGCTGCATTTGACAAATTAGAAGATGAGTTCAGACGGCTGCTTACAGAACACAGTATACCACTTCCCATGTCTTCATCTTCATTGCCTGGGGAACAAGCTTGCATTGCACCATCGCCTCTACCTGTAACCATTATCCAGAAACTGCAAGCAATTCTGAGGAGGTTGATTGCTAACAATAGGCTTGAGAAGTGTATATCGATTTATGTTGATGTTCGCAGTTCTAACGTTAGGGAAAGTTTGCAGGCACTCGGTTTGGATTACCTTGAGATATCTATTTCAGAATTCAATGATGTGCAGCCTATTGAGGGGTATATATCTCAATGGGGAAAGCATTTGGAGTTTGCTGTAAAACACTTGTTTGAGGCAGAGTATAAGCTTTGCAATGATGTCTTTGAGAGGATTGGGTTGGATGTGTGGATGGGTTGCTTTGCCAAGATAGCAGCTCAGGCGGGCATTCTTGCATTTCTTCAATTTGGGAAGACTGTTACAGAAAGCAAGAATGACCCGATTAAGATGTTAAAGCTTCTAGATATATTTGCTTCTTTGAACAAATTGAGACTGGACTTTAACCGGCTTTTTGGTGGAACAGCTTGTTCTGAAATCCAAAATCTCACAAGGGATCTGATTAGGAGGGTGATTGATGGAGCGGCTGAGATCTTCTGGGAACTTCTAGTGCAAGTGGAGTTGCAGAGGCAAAACCCACCTCCTTCAGATGGGGGTGTGCCTAGACTAGTGAGTTTCACCATAGATTACTCCAACAAACTGCTTGGGGATGATTATAAGCCAATTCTAACCCAAGCTCTGATCATTCACCGAAGTTGGAAGAACGAGAAATTCCAAGACGGGCTTCTTGTCAAAGAGGTTCTGAACATTGTTAAAGCCATTGAGACCAATATGGAGACTTGGATGAAGGCTTATGATGATTCAATCCTCTCAAACTTCTTTGCGATGAACAATCATGGGCATTTATTCAAGCACTTGAAAAGTACAAAATTGGGGCATCTTTTGGGGGATTCTTGGCTTCGAGAACATGAACAGTACAAGGATTATTATGCCACAGTTTTCTTGAGAGAAAGCTGGAGCAAGCTTCCGGGTCATTTAAGTAGGGAAGGTCTGATTACATTCTCGGGCGGGCGGGCAACTGCCCGGGATCTTGTCAAGAAACGGCTGAAAACATTCAACGAAGCTTTTGACGGAATGTGTAAGAAACAATCGAATTGGGTTATGCCGGATAAAGAATTGAGGGAGAGAACATGTCAGCTTATAGTGCAAGCAGTTGTACCCGTATATCGAAGCTTCATGCAAAACTATGGCCCTCTAGTTGAGCAAGATTCTAGCTCGAATAAATATGCGAAGTATACAATACAGAATTTGGAGAAAATAATTATGACCCTTTTCCAGCCAAAACCAAGCAGACTTGGCAGTTTCAAAGGGGGGAAACAGCTTAGTGGGAAATTCAGCAGTCGGGTAACAGAAAATCGTCTCACTGATTCTCCTGTTATGTGA 2049 43.48 MAASPSGNNEKSIENLVSARKALKLNLDKSKALGLALAKSGPRLEEISHRLPSLGAAVRPIRADKEALVAVGGHINRAVGPAAAVLKVFEAVHGLEKSLLSDPRNDLPGYLSVLKRLEEALNFLGDNCGLAIQWLEDIVEYLDDNTVADDQYIANLKMSLKNLRELQSNEERTHLDGGLLDAAFDKLEDEFRRLLTEHSIPLPMSSSSLPGEQACIAPSPLPVTIIQKLQAILRRLIANNRLEKCISIYVDVRSSNVRESLQALGLDYLEISISEFNDVQPIEGYISQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFAKIAAQAGILAFLQFGKTVTESKNDPIKMLKLLDIFASLNKLRLDFNRLFGGTACSEIQNLTRDLIRRVIDGAAEIFWELLVQVELQRQNPPPSDGGVPRLVSFTIDYSNKLLGDDYKPILTQALIIHRSWKNEKFQDGLLVKEVLNIVKAIETNMETWMKAYDDSILSNFFAMNNHGHLFKHLKSTKLGHLLGDSWLREHEQYKDYYATVFLRESWSKLPGHLSREGLITFSGGRATARDLVKKRLKTFNEAFDGMCKKQSNWVMPDKELRERTCQLIVQAVVPVYRSFMQNYGPLVEQDSSSNKYAKYTIQNLEKIIMTLFQPKPSRLGSFKGGKQLSGKFSSRVTENRLTDSPVM 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8069916 8072924 - Conep17aG0111000.1 Cone17ag1082 456559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1082 682 MobiDBLite consensus disorder prediction 657 682 - -
Cone17ag1082 682 Gene3D Exocyst complex component Exo70 136 654 - -
Cone17ag1082 682 Pfam Exo70 exocyst complex subunit C-terminal 287 643 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone17ag1082 682 SUPERFAMILY Cullin repeat-like 85 647 IPR016159 -
Cone17ag1082 682 Coils Coil 153 173 - -
Cone17ag1082 682 FunFam Exocyst subunit Exo70 family protein 135 653 - -
Cone17ag1082 682 MobiDBLite consensus disorder prediction 662 682 - -
Cone17ag1082 682 PANTHER EXOCYST COMPLEX PROTEIN EXO70 97 649 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone17ag1082 682 Pfam Exocyst complex component Exo70 N-terminal 80 197 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0022 Cone-Chr17:168964 Cone17ag1082 Cone-Chr17:8069916 1.33E-225 dispersed
Cone17ag1082 Cone-Chr17:8069916 Cone19ag1123 Cone-Chr19:8061899 5.11E-73 dispersed
Cone17ag1082 Cone-Chr17:8069916 Cone20ag0630 Cone-Chr20:3788807 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1082 K07195 - csv:101207478 1093.95