Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag1083 | ATGGCTGTTGAGCTCATCAGATTCGCACGGATGGACGATCAGATGGCTATACAAGAAGCTGCGTCACAAGGATTAAAGAGCATGGAGCACGTGATCCGTCTCCTGTCTCACCATCAACAACAATCTAACCGCGTAGAGTGCACGGATATCGCCGATGTAACCGTTTCCAAGTTTAAAAAAGTAATCTCTCTTCTCGACCGGACCGGACACGCCCGGTTCAGGCGTGGTCCGGTTCAATCATCTGCTTCCCCATCAACATCCGCCTCCGCTTCTGCGTCTGTCTCCGTTCCTCACTCTCTAACGCAAAACCTTACTCCGACTCCATTCGCTTCTTTAACTACCGTTCCTCAGGTTCAGATCTCCGCTCCAGCAGCTGTACCTCAGCTTCCGATCACCGTTCCGGCGAGTTTCGCTCAGTCTCAGTCGCAGCCGCAGACTCTGACTCTTGATTTCACGAGGCCTAATATTTTTAATTCTAATTCTAAGAACACTGACATCGAGTTCGCGAAAGAGTGCTTTAGCGTGGATTCGAGCTCGTCGTTCTTGTCATCGACTATTACCGGAGACGGAAGCGTATCAAACGGCAAGCTAGGAACGTCTATCTTCTTGGTTCAGGGGACGGCAGTATCCGGCGGCAAGCCACCTCTATCTACCGCTCCAAACAAAAAGAGATGTCACGAGCACAGTCACTCCGACAACATCTCCGGCTCCGCCTCAGCCTCCGGAAAATGCCATTGCTCTAAAAGAAGGAAAAATCGGGTGAAGAAAATAATTACAGTTCCGGCTATAAGCTGGAAGATTGCCGATATCCCACCGGACGAGTTCTCATGGAGAAAGTACGGTCAGAAGCCGATCAAGGGTTCACCATACCCACGAGGGTATTACAAGTGTAGTACAATGAGAGGATGTCCAGCGAGGAAACACGTGGAGAGATCTCCAGATGATCCAACGATGCTGATTGTAACATACGAGGGGGAGCACCTTCATACACAGACGGCAATGTAG | 1005 | 50.25 | MAVELIRFARMDDQMAIQEAASQGLKSMEHVIRLLSHHQQQSNRVECTDIADVTVSKFKKVISLLDRTGHARFRRGPVQSSASPSTSASASASVSVPHSLTQNLTPTPFASLTTVPQVQISAPAAVPQLPITVPASFAQSQSQPQTLTLDFTRPNIFNSNSKNTDIEFAKECFSVDSSSSFLSSTITGDGSVSNGKLGTSIFLVQGTAVSGGKPPLSTAPNKKRCHEHSHSDNISGSASASGKCHCSKRRKNRVKKIITVPAISWKIADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERSPDDPTMLIVTYEGEHLHTQTAM | 334 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 8073748 | 8075673 | - | Conep17aG0111100.1 | Cone17ag1083 | 456560 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag1083 | 334 | MobiDBLite | consensus disorder prediction | 213 | 242 | - | - | |
Cone17ag1083 | 334 | Pfam | Plant zinc cluster domain | 222 | 269 | IPR018872 | - | |
Cone17ag1083 | 334 | MobiDBLite | consensus disorder prediction | 75 | 94 | - | - | |
Cone17ag1083 | 334 | FunFam | WRKY transcription factor 65 | 255 | 332 | - | - | |
Cone17ag1083 | 334 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 16 | 331 | IPR044810 | GO:0003700(InterPro) | |
Cone17ag1083 | 334 | SMART | WRKY_cls | 271 | 331 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone17ag1083 | 334 | MobiDBLite | consensus disorder prediction | 78 | 94 | - | - | |
Cone17ag1083 | 334 | ProSiteProfiles | WRKY domain profile. | 266 | 332 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone17ag1083 | 334 | Pfam | WRKY DNA -binding domain | 273 | 329 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone17ag1083 | 334 | Gene3D | WRKY domain | 262 | 332 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone17ag1083 | 334 | SUPERFAMILY | WRKY DNA-binding domain | 269 | 331 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag1083 | Cone-Chr17:8073748 | Cone18ag1268 | Cone-Chr18:8911535 | 2.17E-82 | dispersed | |
Cone17ag1083 | Cone-Chr17:8073748 | Cone20ag0629 | Cone-Chr20:3786118 | 7.81E-149 | wgd | |
Cone17ag1083 | Cone-Chr17:8073748 | Cone4ag1861 | Cone-Chr4:13342698 | 9.99E-135 | wgd | |
Cone17ag1083 | Cone-Chr17:8073748 | Cone7ag1766 | Cone-Chr7:11645922 | 1.29E-129 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45085 | PF00995 | Sec1 | 2.60E-14 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag1083 | - | - | - | 0.0 |