Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1119 ATGGCATCATCACTATCATCTTCTCTGCATCTCTCAGCGCTTAAACCTTCTCTTTTCCGTTCATTGTCTCCACGAGCTCCAGATGTCTTTTCTCCGCGCTGCTTCACGTTTACTCCTTCTCGGAGGCTCGCTCTTCTTCAATTCGGCTCTGCTCTCCCTCAGACAAAGGTACTAGGTGTAGATGTGTCCAATTTATTAAGGGCGGAGGCAAGCACCTTGGAGGCCGCACCGGATGGGAAAAGGGTTCCAGATAGCAGTGTTGTCACTGGGGAAAACATATTGGAATGGGTAAAGCAAGACAAGCGAAGAATGCTTCATGTCGTTTATCGGGTTGGAGATTTGGATAAAACTATAAAATTCTATACTGAATGCCTTGGGATGAAGCTGCTAAGAAAACGTGACATACCAGAGGAGGGATATGCAAATGCTTTTCTCGGATACGGACCTGAAGATTCCAATTTCACTGCTGAACTTACTTACAATTATGGAGTGGAGAAGTATGAGATTGGAAATGGTTTTGGCCATTTTGGTATTGCAGTGGAAGATGTCACCAGAACAGTGGATCTTATTAAGGCAAAGGGGGGGAAAGTTACCAGGGAGCCTGGTCCTGTTAGTGGTGGAAGTACAATTATTGCTTTTGTTGATGACCCTAATGGTTATAAGTTCGAGCTTTTGGAGAGGGGTCCTTCTCCGGAACCCTTTTGTCAAGTCATGCTTCGGGTCGGTGATCTTGACCGCTCAATAGATTTCTACAAAAAGGCTTATGGAATGAAGCTTCTACGCAAAAGGGATAACCCAGAGTACAAGTATACAACAGCCGTCATGGGCTATGGTCCTGAAGATGAGAATGTTGTGGTTGAACTGACATATAATTATGGGGTCATTAATTATGACAAAGGAAACGGTTACACACAGATTGCAGTAGGCACAGATGATGTATACAAGAGTGCAGAAGCAGTCAAACTGTTTGGTGGAAAGGTCATTCGTGAACCTGGACCTTTGCCGGGTATCAACACCAAGATCACTGTTTGCTTGGATCCTGATGGTTGGAAAACATTAAAAGTTTAA 1068 44.19 MASSLSSSLHLSALKPSLFRSLSPRAPDVFSPRCFTFTPSRRLALLQFGSALPQTKVLGVDVSNLLRAEASTLEAAPDGKRVPDSSVVTGENILEWVKQDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEEGYANAFLGYGPEDSNFTAELTYNYGVEKYEIGNGFGHFGIAVEDVTRTVDLIKAKGGKVTREPGPVSGGSTIIAFVDDPNGYKFELLERGPSPEPFCQVMLRVGDLDRSIDFYKKAYGMKLLRKRDNPEYKYTTAVMGYGPEDENVVVELTYNYGVINYDKGNGYTQIAVGTDDVYKSAEAVKLFGGKVIREPGPLPGINTKITVCLDPDGWKTLKV 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8297862 8301370 - Conep17aG0114800.1 Cone17ag1119 456596

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1119 355 ProSitePatterns Glyoxalase I signature 2. 170 182 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
Cone17ag1119 355 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 233 355 IPR037523 -
Cone17ag1119 355 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 102 233 IPR029068 -
Cone17ag1119 355 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 104 224 IPR004360 -
Cone17ag1119 355 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 236 351 IPR004360 -
Cone17ag1119 355 Gene3D - 81 228 IPR029068 -
Cone17ag1119 355 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 103 227 IPR037523 -
Cone17ag1119 355 PANTHER LACTOYLGLUTATHIONE LYASE 84 353 - GO:0004462(PANTHER)|GO:0005737(PANTHER)|GO:0019243(PANTHER)
Cone17ag1119 355 CDD GlxI_Ni 104 225 - -
Cone17ag1119 355 Gene3D - 230 353 IPR029068 -
Cone17ag1119 355 NCBIfam lactoylglutathione lyase 103 228 IPR004361 GO:0004462(InterPro)|GO:0046872(InterPro)
Cone17ag1119 355 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 234 350 IPR029068 -
Cone17ag1119 355 ProSitePatterns Glyoxalase I signature 1. 106 127 IPR018146 GO:0004462(InterPro)|GO:0046872(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1119 K01759 - - cit:102613371 528.094
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1119 Cone-Chr17:8297862 Cone5ag1856 Cone-Chr5:13015866 4.89E-137 dispersed
Cone17ag1119 Cone-Chr17:8297862 Cone4ag0946 Cone-Chr4:7962627 6.87E-179 wgd
Cone17ag1119 Cone-Chr17:8297862 Cone7ag1188 Cone-Chr7:8836543 2.53E-181 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g304 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone17ag1119 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000416 3 8 3 3 3 5 4 5 5 4 4 5 4 4 3 3 5 4 2 5 3 3 4 3 4 3 5 7 6 3 123