Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag1179 | ATGACCTCTTATCTTCAGCCTCTACTGCTATGGCTTGGGGCAACACTTATCTGCAGAGCATTGGATCCAGTGGTTCTACCTTCAGAAGCTAGCCAAGTTGTGAAACAGCGACTTCTTACTTTTGTGCGGTCATTCTCAACAATACTTGCATTTGCTTATTGTCTATCAAGCTTGATTCAACAAGTACAAAAATTCTTTAGTGAGACAAGTGAGTCTGATGATACAAGAAATATGGGATTTGATTTTGCTGGGAAAGCTGTTTATACAGCAGTGTGGGTTGCTGCTCTTTCATTGTTCATGGAGTTGCTTGGTTTCTCTACCCAAAAGTGGCTGACTGCTGGGGGTCTTGGCACTGTATTAATCACCCTGGCTGGCCGAGAGATATTTACAAATTTCCTTTCAAGCATAATGATCCATGCAACCAGGCCATTTGTTCTGAACGAGTGGATTCAAACAAAAATTGAGGGCTATGAAGTTTCTGGTACAGTTGAGCATGTTGGTTGGTGGTCTCCTACAATTATCCGAGGGGATGATCGTGAAGCAGTTCATATTCCAAATCACAAATTTACTGTTAATGTAGTGAGGAACCTTAGCCAGAAGACTCATTGGCGTATCAAGACCCATATTGCCATTAGCCACTTAGATGTCAATAAAATAAATATTGTTGTTGCAGATATGCGCAAAGTCTTGTCCAAAAATCCTCAAGTGGAACAGCAAAGGCTACATAGAAGAGTATTTCTAGAGAATATCAATCCTGAAAACCAGGCTCTTATGATATTGGTTTCTTGCTTTGTCAAAACTTCTCATTTCGAAGAATACCTGTGTGTAAAGGAAGCAATACTCCTAGATCTTCTAAGAGTAGTCAGCCATCACCGGGCCCGCCTTGCAACTCCCATCCGCACTGTTCAGAAAATATATAGTGAAGCCGACCTGGAAAACATACCCTTTGCTGACACTATTTTCACTCAATCTAGAGGAGCAACTAACCGTCCCTGGTTACTAATCGAACCTTCTTACAAAATCAATGGCGATGATAAATCCAAGGCTCCAACTCATTCCATACGTACAAATGACGAAAAGGATGCCATGCAAGAAGCAGCCTCGACATCCAACACCACTAAGGCCCCTGAAAAGAGCGGGCCCGCATCAAATCCCGACTTCAAAACAGATGATAGGGTTGTGGCAAAACCAACCTCCATGTCTGATACTTCAGACAAAAATAACTCTGAAATTCTGGGTTCAAGTAATGACGTAAAAGGAAATGTGGAGACTAAAAATTCCGAGGACACAAAATCTAGAGTGACTATGTCTGAAAAGCCCTCGGTTTCTTTCTCCAAATCTGGGAGTGAAAGAACAGACATTCCTTCTCCTAGCTTGCAGACCAAGCAAGAGGGAGAGAAGCCAAGTGCGTCACCTTCAATGGCCAGTAGACCTCCCTTAGAAGAGAATATAGTTCTAGAAGTTGCTTTAGAGGGCCCGAAACGTACACTTCTAATTCAAGAAGAAGAGATGGGTCCATCTATTTCGGAATCGCAAGAAGTATCGACTCATAGGAAGGAGCTGATTAGTAAGGACATTAAAGATGGTCAGGTTCCTAGTGCAATGCATAATGATTAG | 1617 | 42.24 | MTSYLQPLLLWLGATLICRALDPVVLPSEASQVVKQRLLTFVRSFSTILAFAYCLSSLIQQVQKFFSETSESDDTRNMGFDFAGKAVYTAVWVAALSLFMELLGFSTQKWLTAGGLGTVLITLAGREIFTNFLSSIMIHATRPFVLNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHIAISHLDVNKINIVVADMRKVLSKNPQVEQQRLHRRVFLENINPENQALMILVSCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYSEADLENIPFADTIFTQSRGATNRPWLLIEPSYKINGDDKSKAPTHSIRTNDEKDAMQEAASTSNTTKAPEKSGPASNPDFKTDDRVVAKPTSMSDTSDKNNSEILGSSNDVKGNVETKNSEDTKSRVTMSEKPSVSFSKSGSERTDIPSPSLQTKQEGEKPSASPSMASRPPLEENIVLEVALEGPKRTLLIQEEEMGPSISESQEVSTHRKELISKDIKDGQVPSAMHND | 538 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 8645818 | 8650857 | - | Conep17aG0120900.1 | Cone17ag1179 | 456656 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag1179 | 538 | MobiDBLite | consensus disorder prediction | 436 | 470 | - | - | |
Cone17ag1179 | 538 | MobiDBLite | consensus disorder prediction | 363 | 379 | - | - | |
Cone17ag1179 | 538 | SUPERFAMILY | Sm-like ribonucleoproteins | 128 | 198 | IPR010920 | - | |
Cone17ag1179 | 538 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 1 | 527 | IPR045042 | - | |
Cone17ag1179 | 538 | Gene3D | - | 8 | 142 | - | - | |
Cone17ag1179 | 538 | MobiDBLite | consensus disorder prediction | 344 | 362 | - | - | |
Cone17ag1179 | 538 | Gene3D | - | 144 | 199 | IPR023408 | - | |
Cone17ag1179 | 538 | Pfam | Mechanosensitive ion channel, beta-domain | 128 | 198 | IPR006685 | GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone17ag1179 | 538 | MobiDBLite | consensus disorder prediction | 396 | 421 | - | - | |
Cone17ag1179 | 538 | MobiDBLite | consensus disorder prediction | 344 | 482 | - | - | |
Cone17ag1179 | 538 | MobiDBLite | consensus disorder prediction | 501 | 538 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag1179 | Cone-Chr17:8645818 | Cone9ag1443 | Cone-Chr9:10712007 | 4.44E-224 | dispersed | |
Cone17ag1179 | Cone-Chr17:8645818 | Cone6ag1528 | Cone-Chr6:12026912 | 1.03E-224 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag1179 | K22047 | - | csv:101213477 | 748.429 |