Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1206 ATGGCGTCCTCACCATCTCCTCGAGAAGAGAGCGTGTACATGGCGAAGCTTGCCGAGCAAGCCGAGCGCTATGAAGAGATGGTGGAATTTATGGAGAAGGTATCCGCCTCCGTTGACAACGAGGAGCTAACCGTGGAGGAGAGAAACCTCCTCTCCGTCGCTTACAAGAACGTGATCGGAGCACGGAGGGCCTCGTGGCGTATCATCTCCTCCATCGAGCAGAAAGAGGAGAGCCGAGGCAACGAGGACCACGTCTCTGTGATCCGCGACTACAGATCTAAGATCGAGACCGAGCTTTCCAAAATCTGCGACGGAATCCTTAAGCTTCTTGACACGCGTCTCATTCCCTCGGCTACTTCCGGAGATTCCAAGGTCTTTTACCTGAAAATGAAGGGCGATTACCATAGGTACTTGGCTGAGTTCAAAACTGGAGCCGAACGCAAGGAAGCTGCTGAGAGTACCCTCAGTGCTTACAAATCCGCTCAGGATATTGCAAATGCCGAACTGGCTCCTACTCATCCGATCCGACTTGGATTGGCTCTTAACTTCTCTGTGTTTTACTATGAGATCCTGAACTCTCCTGACCGTGCCTGCAACCTTGCTAAACTGGCTTTTGATGAAGCAATTGCAGAGTTGGATACCCTGGGCGAAGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGAGATAACCTCACCTTGTGGACCTCTGACATGCAGGACGATGGAGCAGATGAGATTAAAGAAGCTGCTCCCAAGCCTGAGGCCGAACAACAGTGA 786 51.02 MASSPSPREESVYMAKLAEQAERYEEMVEFMEKVSASVDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSKIETELSKICDGILKLLDTRLIPSATSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKLAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKPEAEQQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 8795615 8797859 - Conep17aG0123600.1 Cone17ag1206 456683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1206 261 Gene3D - 1 251 IPR036815 -
Cone17ag1206 261 Coils Coil 14 34 - -
Cone17ag1206 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cone17ag1206 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cone17ag1206 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cone17ag1206 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cone17ag1206 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cone17ag1206 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cone17ag1206 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cone17ag1206 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cone17ag1206 261 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone17ag1206 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cone17ag1206 261 PIRSF 14-3-3 2 250 IPR000308 -
Cone17ag1206 261 SMART 1433_4 8 251 IPR023410 -
Cone17ag1206 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Cone17ag1206 261 FunFam 14-3-3 protein epsilon 4 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1206 Cone-Chr17:8795615 Cone18ag1166 Cone-Chr18:8370951 8.03E-150 dispersed
Cone17ag1206 Cone-Chr17:8795615 Cone20ag0521 Cone-Chr20:2823921 1.49E-172 wgd
Cone17ag1206 Cone-Chr17:8795615 Cone4ag1325 Cone-Chr4:10869838 6.90E-162 wgd
Cone17ag1206 Cone-Chr17:8795615 Cone7ag1266 Cone-Chr7:9413986 9.38E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1206 K06630 - gmx:100792014 466.848