Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag1218 | ATGGATAAATTATGCTGTTTTAGTGCTTCTTTCGATGAGCCATCAAACAGCTCGTCGGGCCGGGGAAGGAATCCGGAGGGATCTATCAAATACGGGTTCAGCCTCGTAAAAGGGAGAGCTAATCATCCCATGGAGGATTATCATGTAGCTAAGTTTCTTCATACTCAAGGACATGAATTAGGGCTCTTTGCGCTATATGATGGTCACTCGGGCGATAAAGTTCCAGCCTACTTACAAAAACATCTGTTTTCCAACATCCTGGAAGAGAATGAGTTCTGGGTGGACCCCAGAAGTTCTATCTCGAAGGCATACGAGAAGACGGACAAAGCAATTCTATCCGGTAGCAATGACCTCGGGCAAGGGGGGTCCACTGCTGTAACTGCCATTCTGATCAACGGTCAGAGATTATGGGTAGCCAATCTGGGAGACTCCCGGGCAGTTCTTTCCAGAGGAGGCCAAGCTGTGCAGATGACTACTGACCACGAGCCCCATACTGAACGACAAAGCATCGAGAAAAAAGGCGGCTTTGTTTCAAACATGCCAGGTGATGTGCCTAGAGTTAATGGGCAGCTTGCGGTCTCTCGAGCTTTTGGGGACGAGGGACTTAAATCTCATTTAAGGTCAGACCCAGACATACAAGATGCCAACATCGATTTCAATACTGATTTGCTAATTCTTGCAAGTGATGGCCTTTGGAAGGTGATGGCAAATCAAGAGGCAGTTGATATTGCAAGAAGGGTCAAGGATTCATTGAAGGCTGCTAAGAGTTTAACAGATGAAGCTTTGAAGAAAGAGAGCAGGGATGACATTTCTTGCATTGTTGTCAGATTTGGATGA | 837 | 46.36 | MDKLCCFSASFDEPSNSSSGRGRNPEGSIKYGFSLVKGRANHPMEDYHVAKFLHTQGHELGLFALYDGHSGDKVPAYLQKHLFSNILEENEFWVDPRSSISKAYEKTDKAILSGSNDLGQGGSTAVTAILINGQRLWVANLGDSRAVLSRGGQAVQMTTDHEPHTERQSIEKKGGFVSNMPGDVPRVNGQLAVSRAFGDEGLKSHLRSDPDIQDANIDFNTDLLILASDGLWKVMANQEAVDIARRVKDSLKAAKSLTDEALKKESRDDISCIVVRFG | 278 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 8842993 | 8844550 | - | Conep17aG0124900.1 | Cone17ag1218 | 456695 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag1218 | 278 | CDD | PP2Cc | 29 | 277 | IPR001932 | - | |
Cone17ag1218 | 278 | Gene3D | - | 26 | 278 | IPR036457 | - | |
Cone17ag1218 | 278 | ProSiteProfiles | PPM-type phosphatase domain profile. | 30 | 277 | IPR001932 | - | |
Cone17ag1218 | 278 | SMART | PP2C_4 | 26 | 275 | IPR001932 | - | |
Cone17ag1218 | 278 | SUPERFAMILY | PP2C-like | 27 | 278 | IPR036457 | - | |
Cone17ag1218 | 278 | FunFam | Probable protein phosphatase 2C 39 | 22 | 278 | - | - | |
Cone17ag1218 | 278 | SMART | PP2C_SIG_2 | 41 | 277 | IPR001932 | - | |
Cone17ag1218 | 278 | PANTHER | PROTEIN PHOSPHATASE | 28 | 275 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone17ag1218 | 278 | Pfam | Protein phosphatase 2C | 39 | 270 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag1218 | Cone-Chr17:8842993 | Cone3ag1093 | Cone-Chr3:29567925 | 2.02E-143 | dispersed | |
Cone17ag1218 | Cone-Chr17:8842993 | Cone20ag0507 | Cone-Chr20:2741321 | 2.18E-152 | wgd | |
Cone17ag1218 | Cone-Chr17:8842993 | Cone4ag1335 | Cone-Chr4:10921634 | 9.68E-144 | wgd | |
Cone17ag1218 | Cone-Chr17:8842993 | Cone7ag1594 | Cone-Chr7:10900747 | 2.95E-147 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag1218 | K17506 | - | rcu:8281649 | 454.521 |