Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1252 ATGATATATGCTGTGTTGGGAAGTTCAAGAGAGTTAGCAATAGGACCAGTTGCTGTTGTCTCCTTGCTTCTTTCCTCAATGCTTGAGAAGATTGAAGATCCAATTGCTAACCCAATTGCTTATAGGAAGCTTGTTTTCACTGCCACTTTCTTTGCTGGAGCTTTCCAAACAGCATTTGGCCTTTTTAGGTTGGGATTTCTGATAGATTTTCTTTCTCATGCCGCCATTGTTGGATTCATAGCCGGGGCGGCTATTGTTATCGGTCTTCAACAGCTGAAGGGCTTACTGGGGATTAGTAATTTCACTAGCAAAACCGACGTTGTTTCGGTTTTAGAGTCGGTTTTTAAATCGCTTCACCATCAATGGTACCCTCTTAACTTCGTCCTCGGTTGTTCCTTCTTCATCTTCCTCCTATGTTCTAGATTTATTGGCAGAAGAAACAAGAAGCTATTTTGGCTACCAGCCATTGCTCCACTTATATCTGTCATCTTATCCACACTCATAGTTTACCTAACACGAGCTGATAAGCATGGAATTAAGATTGTAAGACATATCAAAGGAGGGATAAATCCAAGCTCGGTTAATCAGTTACAACTAAACGGCCCTCATCTCGGACAAGCTGCAAAAGTCGGCTTGATAGCCGCAATTGTCGCTCTCACCGAAGCTATTGCAGTTGGCCGATCTTTCGCTTCGATCAAAGGCTACCATCTTGATGGGAACAAGGAAATGGTAGCCATGGGGTTTATGAACATCGTCGGGTCTTTAACTTCCTCCTATGTCGCAACCGGGTCATTTTCGAGAACTGCTGTGAATGTTAGTACCGGATGTCAAACAGTGGTTTCGAATATAGTGATGGCGGTTACGGTGATATTGTCACTAGAACTATTGACTAGATTCTTGTATTTCACTCCCATGTCTATCCTTGCTTCGATCATTTTATCGGCTCTTCCCGGACTTATAGACATTAACGAAGCTTACTACATATGGAAAGTTGACAAGCTAGACTTCCTTGCTTGTATTGGAGCTTTTCTTGGAGTCTTATTTGCTTCTGTGGAAATTGGTCTTCTTGTTGCTATTGCCATCTCATTCAGCAAGATACTACTGAATTCGATCCGACCCGGCATAGAGATACTAGGAAGACTTCCTAGAACAGATACATTCTGCAACATTAACCAATATCCTATGGCCATTAAAACTCAAGACATCTTGATTATCCGGATAAACTCTGGATTGCTTTGTTTTGCCAATGCTAATTTTATTAGAGAAAGGATTATGAGGTGGGTAACAGAAGAAGAAGATAAGATTGAAGAGAATGGTAGAGAAGGGAAACTTGAAGAAGTAATACTTGACATGTCGAATGTTATGAATATTGACACTTCAGGTATAATTGCATTAACGGAGCTCCAAAAGAAATTAATGTCACGTGGAATACAGTTAGCTATGGCGAACCCAAAGTGGCAGATGATTCACAAGTTGAAGATAGGGCAATTTGTTGAAAGAATTGGAGGGAAGGTGTTTTTGACCGTTGGTGAGGCCGTTGATGCATATCTTGGATCTAAGTTGTCTGGTCTTGGTCGTTAA 1581 41.24 MIYAVLGSSRELAIGPVAVVSLLLSSMLEKIEDPIANPIAYRKLVFTATFFAGAFQTAFGLFRLGFLIDFLSHAAIVGFIAGAAIVIGLQQLKGLLGISNFTSKTDVVSVLESVFKSLHHQWYPLNFVLGCSFFIFLLCSRFIGRRNKKLFWLPAIAPLISVILSTLIVYLTRADKHGIKIVRHIKGGINPSSVNQLQLNGPHLGQAAKVGLIAAIVALTEAIAVGRSFASIKGYHLDGNKEMVAMGFMNIVGSLTSSYVATGSFSRTAVNVSTGCQTVVSNIVMAVTVILSLELLTRFLYFTPMSILASIILSALPGLIDINEAYYIWKVDKLDFLACIGAFLGVLFASVEIGLLVAIAISFSKILLNSIRPGIEILGRLPRTDTFCNINQYPMAIKTQDILIIRINSGLLCFANANFIRERIMRWVTEEEDKIEENGREGKLEEVILDMSNVMNIDTSGIIALTELQKKLMSRGIQLAMANPKWQMIHKLKIGQFVERIGGKVFLTVGEAVDAYLGSKLSGLGR 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9006046 9010343 - Conep17aG0128300.1 Cone17ag1252 456729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1252 526 FunFam Sulfate transporter 31 372 519 - -
Cone17ag1252 526 SUPERFAMILY SpoIIaa-like 398 515 IPR036513 -
Cone17ag1252 526 Pfam Sulfate permease family 1 340 IPR011547 GO:0016020(InterPro)
Cone17ag1252 526 PANTHER SULFATE TRANSPORTER 1 515 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone17ag1252 526 Gene3D STAS domain 372 517 IPR036513 -
Cone17ag1252 526 Pfam STAS domain 393 512 IPR002645 -
Cone17ag1252 526 ProSiteProfiles STAS domain profile. 409 516 IPR002645 -
Cone17ag1252 526 CDD STAS_SulP_like_sulfate_transporter 393 507 - -
Cone17ag1252 526 NCBIfam sulfate permease 1 506 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1252 Cone-Chr17:9006046 Cone20ag0475 Cone-Chr20:2541111 0 dispersed
Cone17ag1252 Cone-Chr17:9006046 Cone17ag1253 Cone-Chr17:9017762 2.80E-152 tandem
Cone17ag1252 Cone-Chr17:9006046 Cone20ag0474 Cone-Chr20:2524751 1.85E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1252 K17469 - mdm:139198206 776.548