Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1253 ATGAAGAGTGGCAGTGCTCAATCACCCGATGAAGAACCCGAAAGAAAAGAGATCTATTCTCAATACATATCATCCTCTGACAACAATCATGAAGCACAATATCCAACTTACTTTCACAAAGTAGGGATTCCACAAAAGCAAAACCTCTTCAAGGAGTTCAAGTCCACTGTGAAAGAAACGTTGTTCTCAGATGATCCTCTCCGTCCGTTTAAGAATCAACCAAGATCCCGGAAGTTCATTCTCGGAATCCAGGCCATCTTTCCTATCTTCGAATGGGGCAGAAATTACAATTTTACCAAATTTAGAGGCGATCTTGTTGCCGGACTTACTATAGCAAGTCTGTGCATTCCTCAGGACATTGGATATGCAAAGCTTGCAAATTTGGATCCTCAATATGGACTATATTCGAGTTTTGTTCCACCTTTGATCTATGCTTTCATGGGTAGCTCGAGAGATATAGCCATAGGACCGGTTGCCGTGGTTTCTCTCTTGCTTGGAACCCTACTTTCAAAAGAGATTGACATTGCAGATGCTAAAGCCTATCAACGGCTCGCTTTTACGGCTACTTTCTTTGCCGGGATCACTCAAGCCACACTTGGGATTTTAAGGTTGGGTTTTTTGATCGATTTCTTATCCCATGCCGCCATTGTCGGTTTTATGGCTGGAGCTGCCGTAACTATTGCCCTTCAACAGCTTAAAGGCTTTCTTGGAATAGCAAACTTTACAAAGAAAACTGACATTGTTTCTGTAATGCGTTCTGTTTTCTCCTCTGCTCATCATGGATGGAACTGGCAGACAATAGTCATTGCAGCAAGCTTTTTATGCTTCCTTCTATTTGCTAAGTACATTGGAAAGAAGAACAAGAAGCTCTTCTGGGTCCCCGCAATTGCTCCTTTGGTATCGGTTATTCTATCTACCCTTTTCGTTTACCTTACTCACGCTGAAAAAAAAGGAGTCGCAATCGTAAGAAAAATAGACAAAGGTATCAATCCCTCATCGGTAAATGAAATATACTTCACCGGTGAATTTCTCCTCAAAGGTTTCCGGATCGGAGTTGTTGCCGGTATAATAGCACTAACTGAAGCTATAGCAATTGGAAGAACATTTGCATCCATGAAAGACTACCAACTGGATGGGAACAAAGAAATGGTTGCCCTAGGAACGATGAATGTTATCGGTTCAATGACTTCTTGCTATGTAGCGACCGGTTCGTTTTCCCGATCAGCCGTGAATTACATGGCCGGTTGCCAAACAGCTGTTTCGAACATTGTCATGTCATGTGTTGTGTTCTTGACTCTAGAGTTTTTGACTCCACTTTTCAAGTACACTCCAAATGCTATTCTTTCCGCCATCATTATCTCCGCTGTGCTCAACTTGATTGACTTTCAAGCAGCTATTTTGCTATGGAAGATTGATAAGATTGACTTTGTGACTTGCATGGGAGCCTTCTTTGGTGTCGTCTTTGCCTCCGTCGAGATCGGTCTCTTAATCGCGGTTGTGATATCCTTCCTTAAGATACTCTTAAGAGTTACTAGACCGAGAACGGTGATTCTAGGATATTGCGATGGTTGA 1572 42.3 MKSGSAQSPDEEPERKEIYSQYISSSDNNHEAQYPTYFHKVGIPQKQNLFKEFKSTVKETLFSDDPLRPFKNQPRSRKFILGIQAIFPIFEWGRNYNFTKFRGDLVAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTLLSKEIDIADAKAYQRLAFTATFFAGITQATLGILRLGFLIDFLSHAAIVGFMAGAAVTIALQQLKGFLGIANFTKKTDIVSVMRSVFSSAHHGWNWQTIVIAASFLCFLLFAKYIGKKNKKLFWVPAIAPLVSVILSTLFVYLTHAEKKGVAIVRKIDKGINPSSVNEIYFTGEFLLKGFRIGVVAGIIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNVIGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSCVVFLTLEFLTPLFKYTPNAILSAIIISAVLNLIDFQAAILLWKIDKIDFVTCMGAFFGVVFASVEIGLLIAVVISFLKILLRVTRPRTVILGYCDG 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9017762 9022924 + Conep17aG0128400.1 Cone17ag1253 456730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1253 523 PANTHER SULFATE TRANSPORTER 59 520 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone17ag1253 523 MobiDBLite consensus disorder prediction 1 22 - -
Cone17ag1253 523 Pfam Sulfate permease family 101 481 IPR011547 GO:0016020(InterPro)
Cone17ag1253 523 ProSitePatterns SLC26A transporters signature. 130 151 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cone17ag1253 523 NCBIfam sulfate permease 88 520 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1253 Cone-Chr17:9017762 Cone20ag0474 Cone-Chr20:2524751 3.30e-316 dispersed
Cone17ag1252 Cone-Chr17:9006046 Cone17ag1253 Cone-Chr17:9017762 2.80E-152 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1253 K17470 - mdm:103401023 825.083