Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1257 ATGGAAACAGAGACCACTTCCAGTGCGGAAAACGACGGCTCTGCTCCTGCTCCTAGCGACAGAGCCGATATGGACACTGATCAAAAAGACATCGAGCGGGAGAACCTACCGGAGTCTTACTCGAAAACGATGAAGCGGCGTTCCGGTTTTCTTCTTGAGGTCGGTACTCGCGTCCTCTGCCGTTGGAGGGACGGAAAGTATCATCCTGTTAAGGTCATCGAGCGCCGCAAATTGACGTCTGGTTATCCTGTTGATTACGAGTATTACGTGCATTACACTGAGTTCAATAGGAGGCTCGATGAATGGGTGAAGCTTGACCAGCTTGATCTTGATTCAGTTGAGTCTGTTATCGATGAGAAAGTGGAGGACAAGGTAACAAGCTTAAAAATGACACGCCACCAGAAGCGGAAGATTGACGAAACTCATGTAGAGGGTCATGAGGAACTTGATGCTGCCAGTTTACGTGAGCATGAAGAGTTCACGAAAGTGAAAAATATAGCAACCATAGAACTTGGAAGATATGAGATTGAAACATGGTATTTCTCCCCTTTTCCGCCAGAATACAATGACTGTGTGAAGCTCTATTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTTCAAAGGCACATGAAGAAGTGTGATCTGAAGCATCCACCCGGTGATGAGATTTACAGAAGTGGTACACTGTCCATGTTTGAGGTTGATGGAAAAAAGAACAAGGTTTATGGGCAGAATCTCTGTTACTTGGCAAAATTGTTTCTTGATCATAAAACTCTATACTATGACGTCGACCTTTTTCTATTTTATATCCTGTGTGAGTGTGATGATCGAGGATGCCACATGGTTGGATATTTTTCCAAGGAAAAGCATTCAGAAGAATCCTATAATTTGGCGTGCATCCTCACCCTTCCTCCTTATCAACGGAAAGGCTATGGAAAGTTCTTAATTGCTTTCTCATACGAACTGTCAAAGAAAGAAAGCAAAGTGGGGACACCAGAAAGACCCCTTTCTGACCTTGGATTAGTGAGCTACAGAGGATATTGGACTCGAGTTCTTCTAGACATCTTGAAAAGGCACAAAGGCAATATCTCGATCAAGGAACTTAGCGACATGACAGCAATTAAGGCTGAAGATATACTAAACACACTTCAAAGCCTAGAGTTGATCCAATACAGAAAAGGGCAGCACGTAATCTGTGCGGACCCTAAAGTCTTGGACCGTCATCTGAAAGCTGCTGGTCGAGGTGGTCTCGAGGTTGACGTTTCTAAATTGATCTGGACTCCTTATAAGGAACAAGGATAA 1314 43.76 METETTSSAENDGSAPAPSDRADMDTDQKDIERENLPESYSKTMKRRSGFLLEVGTRVLCRWRDGKYHPVKVIERRKLTSGYPVDYEYYVHYTEFNRRLDEWVKLDQLDLDSVESVIDEKVEDKVTSLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCVKLYFCEFCLNFMKRKEQLQRHMKKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYILCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKESKVGTPERPLSDLGLVSYRGYWTRVLLDILKRHKGNISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQG 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9051917 9055417 - Conep17aG0128800.1 Cone17ag1257 456734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1257 437 Pfam MYST family zinc finger domain 163 217 IPR040706 -
Cone17ag1257 437 CDD NAT_SF 273 329 - -
Cone17ag1257 437 Gene3D - 41 161 - -
Cone17ag1257 437 MobiDBLite consensus disorder prediction 1 39 - -
Cone17ag1257 437 Gene3D - 162 218 - -
Cone17ag1257 437 Gene3D - 220 432 - -
Cone17ag1257 437 FunFam Histone acetyltransferase 160 217 - -
Cone17ag1257 437 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 162 433 IPR016181 -
Cone17ag1257 437 FunFam Histone acetyltransferase 220 347 - -
Cone17ag1257 437 Pfam RNA binding activity-knot of a chromodomain 52 110 IPR025995 -
Cone17ag1257 437 Pfam MOZ/SAS family 222 399 IPR002717 GO:0004402(InterPro)|GO:0006355(InterPro)
Cone17ag1257 437 CDD CBD_MOF_like 55 124 - -
Cone17ag1257 437 PANTHER HISTONE ACETYLTRANSFERASE 38 434 IPR050603 GO:0000790(PANTHER)|GO:0003712(PANTHER)|GO:0045892(PANTHER)|GO:0045944(PANTHER)
Cone17ag1257 437 Gene3D - 340 420 IPR036388 -
Cone17ag1257 437 MobiDBLite consensus disorder prediction 22 39 - -
Cone17ag1257 437 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 161 432 IPR002717 GO:0004402(InterPro)|GO:0006355(InterPro)
Cone17ag1257 437 SMART chromo_7 66 125 IPR000953 -
Cone17ag1257 437 SUPERFAMILY Chromo domain-like 47 162 IPR016197 -
Cone17ag1257 437 FunFam Histone acetyltransferase 41 161 - -
Cone17ag1257 437 FunFam Histone acetyltransferase 340 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1257 Cone-Chr17:9051917 Cone20ag0470 Cone-Chr20:2477098 0 wgd
Cone17ag1257 Cone-Chr17:9051917 Cone4ag1369 Cone-Chr4:11120228 3.49E-269 wgd
Cone17ag1257 Cone-Chr17:9051917 Cone7ag1562 Cone-Chr7:10733882 2.24E-60 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1257 K11308 - cit:102608219 785.408