Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag1261 | ATGGATCTGGGGAGGAAAGGAAGGAAACCGAGGCTCGATCGCCGCAACGCTGCAAAAAACATCGATTATGACGCTGTGTCTTCGTCTTCGACAATCGATGATTCGTCGGAGTTGCTTTACACTCGGTCGCTTGAGCTTCCTGAAAGAAAGAGCTTCCGGATTGAGGGAAATTACGGCGATTTTGATAGGTTATGTTTGAGCTTGGGGCTGTCAGGGCCCGACGACTTCGCGATATCGGCGTCGGCGTGGGAGGCCATGAAAGAACGTTCATCTTCGGATCTTCTACCGAGGTCCAGGCTGCTCCAGGTGGATAGTCTGGAGGATGAGAAAGTTGATGAGGAGAAGAATGCGCTTGCAGCTGAATCGTTGTCTGAGAGAGTTATGGATTCTGTTAGAATCAGGGATGACACCGAGTTGAGTCACAATGAATCTCCCGAGTCAAGCGGCTGCTGTGCTACTACTACTACTAGTGCTGCAGCTGTGCATTCCGTTAGAGTTAGGGATGCGGCCAGGTTGACTCAGATTGCACCTTCCGAATCAAGTGCCAGCTGTATTGCTAGTACCGGAGGTGGTGGCGGCGGAGGGGGAATTAATGGAGTTAGGCCGCCATTACTCAAGCCCCCACCATCCATGCGGCTTCTCGCTGTTGATAATACAAGCTCGACTTGGGACTTACTTAGGGCTTTTGCTCCAGGTGACGATGAAGCAGAGTCTTCAACAATGTTACAAGGTCAGAATAGTTGTTCTTCTGAAGAACATGATGATGATCTAGAAGAGGAGGTTGGTGATAGACCGGTTGTAAAGGAAGAAGAAGAGGGCAATATCTTACAAGTTGTGGAGAGTACTGTGCTTTTGGAGTCGGGCCCATCATCTTCATTTACAACTTCAAATGATGATGATTCTTCTAGCACGACCACGGACCCTTCAACCAACAATTCACCAGTTGCAGGGTTCAGTCTCGCTTTTACAGACTGGGATAAGGGTGAACTTCTTGGCCGTGGGTCGTTTGGATCGGTGTATGAAGGAATTACTAAAGATGGATCATTTTTTGCTGTCAAAGAAGTTTCACTGCTTGATCAAGGCAGTCAGGGAAGGCAGAGCATTTCTCAACTTGAGCAGGAGATTTATTTTCTAAGCAAGTTCGAGCATGAGAACATAGTTCGGTACCATGGGACAGCTAAGGATGAATCTAAGCTCTATATTTTTCTCGAGCTTGTAACAAAAGGTTCCCTAATGAGTCTCTATCAGAAGTACACTCTTCGAGAATCGCTAGTTTCTGCTTACACAGTACAGCTTCTGCGTGGTTTGAAGTATTTACATGACCAAGGAGTGGTTCACAGGGACATAAAATGTGCAAATATATTGGTGGATGTCAAGGGTTCAGTAAAGCTTGCAGATTTTGGACTGGCAAAGGTGACAAAACTAAATGATGTTAGATCCTGCAAGGGGACTGCATTTTGGATGGCACCGGAGGTTGTTAATCGAAAGAGTCAAGGGTATGGACTCCCAGCTGATATCTGGAGCCTTGGGTGCACCGTCTTAGAGATGTTAACTCGTCAAATACCGTACTCTGATTTGGAAAATCCGATGCAGGCGTTATTCAGGATCGGAAGAGGTATTCCACCTCTTGTCCCTGATTCTCTCTCAGAAGATGCAAGAAATTTCGTTCTGAAGTGCTTACAAGTTAATCCTAACGACCGCCCCACAGCTGCTTTTCTCTTGAATGATCGATTCATCAAAAGTTCATTTCCCGCTTAA | 1758 | 46.53 | MDLGRKGRKPRLDRRNAAKNIDYDAVSSSSTIDDSSELLYTRSLELPERKSFRIEGNYGDFDRLCLSLGLSGPDDFAISASAWEAMKERSSSDLLPRSRLLQVDSLEDEKVDEEKNALAAESLSERVMDSVRIRDDTELSHNESPESSGCCATTTTSAAAVHSVRVRDAARLTQIAPSESSASCIASTGGGGGGGGINGVRPPLLKPPPSMRLLAVDNTSSTWDLLRAFAPGDDEAESSTMLQGQNSCSSEEHDDDLEEEVGDRPVVKEEEEGNILQVVESTVLLESGPSSSFTTSNDDDSSSTTTDPSTNNSPVAGFSLAFTDWDKGELLGRGSFGSVYEGITKDGSFFAVKEVSLLDQGSQGRQSISQLEQEIYFLSKFEHENIVRYHGTAKDESKLYIFLELVTKGSLMSLYQKYTLRESLVSAYTVQLLRGLKYLHDQGVVHRDIKCANILVDVKGSVKLADFGLAKVTKLNDVRSCKGTAFWMAPEVVNRKSQGYGLPADIWSLGCTVLEMLTRQIPYSDLENPMQALFRIGRGIPPLVPDSLSEDARNFVLKCLQVNPNDRPTAAFLLNDRFIKSSFPA | 585 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 9077026 | 9084431 | + | Conep17aG0129200.1 | Cone17ag1261 | 456738 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag1261 | 585 | MobiDBLite | consensus disorder prediction | 234 | 273 | - | - | |
Cone17ag1261 | 585 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 444 | 456 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone17ag1261 | 585 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 122 | 581 | IPR050538 | - | |
Cone17ag1261 | 585 | ProSitePatterns | Protein kinases ATP-binding region signature. | 331 | 353 | IPR017441 | GO:0005524(InterPro) | |
Cone17ag1261 | 585 | SUPERFAMILY | Protein kinase-like (PK-like) | 299 | 581 | IPR011009 | - | |
Cone17ag1261 | 585 | MobiDBLite | consensus disorder prediction | 287 | 313 | - | - | |
Cone17ag1261 | 585 | SMART | serkin_6 | 325 | 579 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone17ag1261 | 585 | Pfam | Protein kinase domain | 326 | 579 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone17ag1261 | 585 | Coils | Coil | 103 | 123 | - | - | |
Cone17ag1261 | 585 | ProSiteProfiles | Protein kinase domain profile. | 325 | 579 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone17ag1261 | 585 | FunFam | Mitogen-activated protein kinase 1, putative, expressed | 323 | 585 | - | - | |
Cone17ag1261 | 585 | Gene3D | Transferase(Phosphotransferase) domain 1 | 322 | 584 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag1261 | Cone-Chr17:9077026 | Cone8ag0976 | Cone-Chr8:9169745 | 3.39E-142 | dispersed | |
Cone17ag1261 | Cone-Chr17:9077026 | Cone20ag0467 | Cone-Chr20:2449845 | 1.35E-277 | wgd | |
Cone17ag1261 | Cone-Chr17:9077026 | Cone4ag1372 | Cone-Chr4:11134160 | 2.22E-181 | wgd | |
Cone17ag1261 | Cone-Chr17:9077026 | Cone7ag1559 | Cone-Chr7:10715928 | 1.09E-178 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82284 | PF00462 | Glutaredoxin | 1.30E-06 | CL0172 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag1261 | K13414 | - | cit:102609376 | 630.943 |