Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1261 ATGGATCTGGGGAGGAAAGGAAGGAAACCGAGGCTCGATCGCCGCAACGCTGCAAAAAACATCGATTATGACGCTGTGTCTTCGTCTTCGACAATCGATGATTCGTCGGAGTTGCTTTACACTCGGTCGCTTGAGCTTCCTGAAAGAAAGAGCTTCCGGATTGAGGGAAATTACGGCGATTTTGATAGGTTATGTTTGAGCTTGGGGCTGTCAGGGCCCGACGACTTCGCGATATCGGCGTCGGCGTGGGAGGCCATGAAAGAACGTTCATCTTCGGATCTTCTACCGAGGTCCAGGCTGCTCCAGGTGGATAGTCTGGAGGATGAGAAAGTTGATGAGGAGAAGAATGCGCTTGCAGCTGAATCGTTGTCTGAGAGAGTTATGGATTCTGTTAGAATCAGGGATGACACCGAGTTGAGTCACAATGAATCTCCCGAGTCAAGCGGCTGCTGTGCTACTACTACTACTAGTGCTGCAGCTGTGCATTCCGTTAGAGTTAGGGATGCGGCCAGGTTGACTCAGATTGCACCTTCCGAATCAAGTGCCAGCTGTATTGCTAGTACCGGAGGTGGTGGCGGCGGAGGGGGAATTAATGGAGTTAGGCCGCCATTACTCAAGCCCCCACCATCCATGCGGCTTCTCGCTGTTGATAATACAAGCTCGACTTGGGACTTACTTAGGGCTTTTGCTCCAGGTGACGATGAAGCAGAGTCTTCAACAATGTTACAAGGTCAGAATAGTTGTTCTTCTGAAGAACATGATGATGATCTAGAAGAGGAGGTTGGTGATAGACCGGTTGTAAAGGAAGAAGAAGAGGGCAATATCTTACAAGTTGTGGAGAGTACTGTGCTTTTGGAGTCGGGCCCATCATCTTCATTTACAACTTCAAATGATGATGATTCTTCTAGCACGACCACGGACCCTTCAACCAACAATTCACCAGTTGCAGGGTTCAGTCTCGCTTTTACAGACTGGGATAAGGGTGAACTTCTTGGCCGTGGGTCGTTTGGATCGGTGTATGAAGGAATTACTAAAGATGGATCATTTTTTGCTGTCAAAGAAGTTTCACTGCTTGATCAAGGCAGTCAGGGAAGGCAGAGCATTTCTCAACTTGAGCAGGAGATTTATTTTCTAAGCAAGTTCGAGCATGAGAACATAGTTCGGTACCATGGGACAGCTAAGGATGAATCTAAGCTCTATATTTTTCTCGAGCTTGTAACAAAAGGTTCCCTAATGAGTCTCTATCAGAAGTACACTCTTCGAGAATCGCTAGTTTCTGCTTACACAGTACAGCTTCTGCGTGGTTTGAAGTATTTACATGACCAAGGAGTGGTTCACAGGGACATAAAATGTGCAAATATATTGGTGGATGTCAAGGGTTCAGTAAAGCTTGCAGATTTTGGACTGGCAAAGGTGACAAAACTAAATGATGTTAGATCCTGCAAGGGGACTGCATTTTGGATGGCACCGGAGGTTGTTAATCGAAAGAGTCAAGGGTATGGACTCCCAGCTGATATCTGGAGCCTTGGGTGCACCGTCTTAGAGATGTTAACTCGTCAAATACCGTACTCTGATTTGGAAAATCCGATGCAGGCGTTATTCAGGATCGGAAGAGGTATTCCACCTCTTGTCCCTGATTCTCTCTCAGAAGATGCAAGAAATTTCGTTCTGAAGTGCTTACAAGTTAATCCTAACGACCGCCCCACAGCTGCTTTTCTCTTGAATGATCGATTCATCAAAAGTTCATTTCCCGCTTAA 1758 46.53 MDLGRKGRKPRLDRRNAAKNIDYDAVSSSSTIDDSSELLYTRSLELPERKSFRIEGNYGDFDRLCLSLGLSGPDDFAISASAWEAMKERSSSDLLPRSRLLQVDSLEDEKVDEEKNALAAESLSERVMDSVRIRDDTELSHNESPESSGCCATTTTSAAAVHSVRVRDAARLTQIAPSESSASCIASTGGGGGGGGINGVRPPLLKPPPSMRLLAVDNTSSTWDLLRAFAPGDDEAESSTMLQGQNSCSSEEHDDDLEEEVGDRPVVKEEEEGNILQVVESTVLLESGPSSSFTTSNDDDSSSTTTDPSTNNSPVAGFSLAFTDWDKGELLGRGSFGSVYEGITKDGSFFAVKEVSLLDQGSQGRQSISQLEQEIYFLSKFEHENIVRYHGTAKDESKLYIFLELVTKGSLMSLYQKYTLRESLVSAYTVQLLRGLKYLHDQGVVHRDIKCANILVDVKGSVKLADFGLAKVTKLNDVRSCKGTAFWMAPEVVNRKSQGYGLPADIWSLGCTVLEMLTRQIPYSDLENPMQALFRIGRGIPPLVPDSLSEDARNFVLKCLQVNPNDRPTAAFLLNDRFIKSSFPA 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9077026 9084431 + Conep17aG0129200.1 Cone17ag1261 456738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1261 585 MobiDBLite consensus disorder prediction 234 273 - -
Cone17ag1261 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag1261 585 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 122 581 IPR050538 -
Cone17ag1261 585 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524(InterPro)
Cone17ag1261 585 SUPERFAMILY Protein kinase-like (PK-like) 299 581 IPR011009 -
Cone17ag1261 585 MobiDBLite consensus disorder prediction 287 313 - -
Cone17ag1261 585 SMART serkin_6 325 579 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag1261 585 Pfam Protein kinase domain 326 579 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag1261 585 Coils Coil 103 123 - -
Cone17ag1261 585 ProSiteProfiles Protein kinase domain profile. 325 579 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag1261 585 FunFam Mitogen-activated protein kinase 1, putative, expressed 323 585 - -
Cone17ag1261 585 Gene3D Transferase(Phosphotransferase) domain 1 322 584 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1261 Cone-Chr17:9077026 Cone8ag0976 Cone-Chr8:9169745 3.39E-142 dispersed
Cone17ag1261 Cone-Chr17:9077026 Cone20ag0467 Cone-Chr20:2449845 1.35E-277 wgd
Cone17ag1261 Cone-Chr17:9077026 Cone4ag1372 Cone-Chr4:11134160 2.22E-181 wgd
Cone17ag1261 Cone-Chr17:9077026 Cone7ag1559 Cone-Chr7:10715928 1.09E-178 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82284 PF00462 Glutaredoxin 1.30E-06 CL0172 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1261 K13414 - cit:102609376 630.943