Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1273 ATGGTGAAAACCCATCTAGAAGTTCTTGGTGTCCTGGACAAATCCAAGACGCAGATGTACCACTTTCTCACAGTGGTCATAGCCGGATCAGGATTCTTCACGGATTCCTACGATCTATTCTGCATCTCTCTAGTCACAAAGCTTCTCGGCAGAATCTACTACGACGTTCCGGGTTCTTCGAAGCCGGGAAGCTTGCCGCCTAATGTTGCTGCTGCTGTTAATGGGGTTGCTCTCTGTGGAACCTTTGCTGGACAACTTTTCTTTGGAAGGCTTGGTGACAAGCTTGGAAGAAAACGTGTCTATGGAATCACTCTCATGCTCATGTTTATTTGCTCCATCGGTTCCGGTCTATCTTTCGGTGACTCGCCTAAATCTGTTATGGCCACCCTCTGCTTTTTTAGGTTTTGGTTAGGGTTTGGGATTGGTGGTGACTACCCATTGTCCGCAACGATCATGGCGGAATATTCCAACAAGAAAACTCGTGGGAGTTTCATTGCCGCCGTCTTCGCCATGCAAGGGTTCGGTATCTTAGCCGGCGGCACTGTCGCAATTGCAGTCGCATCACTGTTCAAGTATTTTTTCCCTGCACCATCTTATGCTGTTAATGCGATCGCCTCTACCGTACCACAAGCCGACTATGTATGGCGGATTATTCTCATGTTTGGTGCTCTACCTGCTGCTTTGACCTACTATTGGCGTATGAAAATGCCGGAAACCGCCCGTTACACTGCTTTAGTTGCCAAGGATTGCAAGAAAGCTTCGCAAGACATGGCAAAGGTGTTAAATATTGAGATTGATCAAGGAACTAGAGGACAGCAAGGCGCAGAGGTTCAAGAGAATGGAGGAAGAAACTCTTTTAAGTTGTTCTCAAAAGAGTTCATGCAAATCCATGGGCGTCACCTAATCGGAACAACAATGACCTGGTTTTTGCTTGATATTGCTTACTACAGCCAGAATCTCTTCCAGAAGGACATATTTAGTGCCGTTGGATGGTTGCCTGCTCCTAAGACAATGAGTGCCTTACAGGAGCTTTATATGATTGCTAGGGCACAAACCCTAATTGCACTTTGTGGCACTGTTCCTGGCTATTGGGTTACGGTTTTCACCATTGATCATTTGGGGAGATTTACTATTCAACTCATCGGGTTCTTATTCATGACAATATCCATGTTGGGACTAGCAATTCCGTATCATCATTGGACCTTGAAGGAAAACAAGATTGGTTTTGTGGCATTGTATGCAATGACTTTCTTCTTTGCCAATTTTGGACCTAATAGCACTACATTTGTTATTCCGGCCGAGATTTTCCCGGCAAGGTTTCGGTCAACTTGTCATGGAATTTCAGCTGCTTCCGGAAAGGTCGGGGCAATAATAGGAGCATTTGGTTTCTTGTATGCTGCTCAAAGTCAAGATAAGAATAAAACCGATGCCGGTTACCATCCCGGAATTGGAGTTAGGAATTCTCTTCTAGTACTGGCCGGGATTAGTCTTCTTGGATTATTTTTCACTTTTCTGGTGCCGGAAACGAAAGGGAAATCTTTGGAAGAGATGTCAAATGAGAATATTGGAGAAGAAGATAAAACGATAGTCGTCAAATCAGTTGATATCGTTTAA 1614 44.61 MVKTHLEVLGVLDKSKTQMYHFLTVVIAGSGFFTDSYDLFCISLVTKLLGRIYYDVPGSSKPGSLPPNVAAAVNGVALCGTFAGQLFFGRLGDKLGRKRVYGITLMLMFICSIGSGLSFGDSPKSVMATLCFFRFWLGFGIGGDYPLSATIMAEYSNKKTRGSFIAAVFAMQGFGILAGGTVAIAVASLFKYFFPAPSYAVNAIASTVPQADYVWRIILMFGALPAALTYYWRMKMPETARYTALVAKDCKKASQDMAKVLNIEIDQGTRGQQGAEVQENGGRNSFKLFSKEFMQIHGRHLIGTTMTWFLLDIAYYSQNLFQKDIFSAVGWLPAPKTMSALQELYMIARAQTLIALCGTVPGYWVTVFTIDHLGRFTIQLIGFLFMTISMLGLAIPYHHWTLKENKIGFVALYAMTFFFANFGPNSTTFVIPAEIFPARFRSTCHGISAASGKVGAIIGAFGFLYAAQSQDKNKTDAGYHPGIGVRNSLLVLAGISLLGLFFTFLVPETKGKSLEEMSNENIGEEDKTIVVKSVDIV 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9167568 9169297 + Conep17aG0130400.1 Cone17ag1273 456750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1273 537 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 15 516 - -
Cone17ag1273 537 SUPERFAMILY MFS general substrate transporter 13 518 IPR036259 -
Cone17ag1273 537 Gene3D MFS general substrate transporter like domains 21 262 IPR036259 -
Cone17ag1273 537 Gene3D MFS general substrate transporter like domains 278 532 IPR036259 -
Cone17ag1273 537 FunFam Inorganic phosphate transporter 1-6 20 530 - -
Cone17ag1273 537 Pfam Sugar (and other) transporter 25 519 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone17ag1273 537 NCBIfam phosphate:H+ symporter 12 520 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cone17ag1273 537 CDD MFS_PhT 25 510 - -
Cone17ag1273 537 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 511 IPR020846 GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0947 Cone-Chr12:8222927 Cone17ag1273 Cone-Chr17:9167568 1.08E-50 dispersed
Cone17ag1273 Cone-Chr17:9167568 Cone4ag0326 Cone-Chr4:1480205 4.25E-284 dispersed
Cone12ag0948 Cone-Chr12:8223413 Cone17ag1273 Cone-Chr17:9167568 1.28E-69 transposed
Cone12ag0949 Cone-Chr12:8223864 Cone17ag1273 Cone-Chr17:9167568 1.83E-64 transposed
Cone20ag0981 Cone-Chr20:6960757 Cone17ag1273 Cone-Chr17:9167568 1.96E-81 transposed
Cone17ag1273 Cone-Chr17:9167568 Cone20ag0453 Cone-Chr20:2323048 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1273 K08176 - cit:102618052 788.875