Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1276 ATGGCGGAGGAAGCGCAAGAAAACGATACGCCTAAGAGTGTTGTGAAGGAGGAAGCAGCGACGCACGATATCGAATCGCAAATTCAGAGTGCCATGCGGTCCAGGGTTTCTTACTTCAAGGAGCAGGCCGACTCTTTAACTCTTGAGAAGGTTAGGAGGTTATTAGAGAAAGACTTGGGTTTGGAAATTTATGCTTTAGATAAGCATAAGAGATATATCAAGCAGAGCTTGGAGAAGTACTTAGATGGTTCCCATGACACTCATGCTTCAAAGAATTCTGTGGAGACTGGTGGAGAAAGGGTAATGAAAGGAGAAGCAGCTGAATCACTAGAAGAGCATCGGTCAAAGAAAGATGTAAAAGAACCTTGCTCGGAAGATGAAGAGGAAACGAAAGACTCTCCAGTGATGGGTCTTCTGATAGGACATAAACAGGCAAAACTGAACGCTGAGGAAATCAAAAACAATGACAGCAAAGGAGTGCCAAGTGAAATCACAATAAAGAAAGCAATTAAAAAAAGAGCTTCTTACTTCAAAGCCAATTCACATAAAGTAACTATGACTGAAGTTCGCCGCCTTTTGGAGGATGACCTTAAGATTGATGAACATACCCTTGATCCCTGTAAGAAGCTAATATCTCAGCAAGTAGAGGAGATATTAAGTTCTTCTGAAGTCCCTAAATCTGCTCCTGTTGGCAAGAAAAAATCTGATTCCAAAGCATCTAAAAAGGTTACCAGCAAAGAGAGTTCTGATTCCGCTGACAGTGAAAGTGGTGAGAACGAAGGTGATGAAGAAAAACCTAAAAGGAAAACTATTCCAAAAGGGAAAATGCAGAAATCTGATGGGCTTAAAAAACGGAAAAGACCCATGGCAGAAACTGTCACTGTAAAGAAGCAGAGTAAGTCTGCACGGCCAGCAGTAGAGGATGATATTGATGAAGATGGAGGAAATGTCTCTGAAGATGGTCAGTCTCAGTCATCTGGTGAAAAACCTGTAAAGAAGAAAGAAGTTTCAACTCCAGCCTATGGAAAACGTGTGGAGCATCTCAAATCGGTTATCAAGTCATGTGGGATGAGTGTTCCCCCCTCAGTGTACAAGAAAGTAAAGCAGGTACCTGAAAATAAACGTGAAGCCCAACTAATTAAGGAGTTGGAGGAGATACTCTCTAAAGAGGGATTATCTTCAAACCCTTCTGAAAAAGAAATTAAGGAAGTGAAGAAGAAAAAGGAAAGGGCAAAGGAACTTGAGGGTATTGACACTAGTAATATTGTATCGAGTTCAAGAAGAAGGTCCACAACTAGCTTTGTATCACCTCCAAAGCCGAAGATAGAAGTTGAAAGTGACAGTGATGATTCTGAAGAAGAAGAAGAAGATGATGATGATGATGATGAGGTTGATGAAGACAATGACAACAATGAAGAGGATGAAGATGTAGAAGATAACGGTGATGGCAGCCAAAGCGAAGAAGAAGTTAATGAGGAAGAAGACACCCCCATCACTCGCTTCCGACAGTACAGTGCCGCCATCTCCTTCCTCAAATTTCAAGCTCAATCTCTTGACCTCCAAACTCTTAACTCTACAATACGATACAATAAAACTACTCCTCGTCGTAACTTGGCCCGGGTCAAACCCCTACCTTCCCTCCGTTCTGTTCAACTCGCACATAGATTCCGTCCCGACCGAATCTTCCAAGTGGATCCACCCTCCCTTCGCCGCCGTCCGATCCTCAACGGAAAAATCTTCCCCCGCGGCACCCAAGATGATAAATGCATTGGCGTCCAGTACATGGAGGCCATACGAAACCTCAAACGTAGAAACTGTTATCCCGTCCGTACGATTCACGTGTCGTACGTCCCGGACGAGGAGATCGGAGGATTCGATCGGATTAGTAAATTCGTGGAATTGTTCGAGTTCAAGAACTTGAACGTCGGATTTGTGATGGACGAAGGCCAGGCATCGCCTGGAGATGAATATAGGGTTTTCTACGCTGATAGGACGCCATGGGATTTGATTATTAGGGCTAAAGGAACTCCTGGTCATGGTTCTAGAATGTATTATAATAGCGCAATGGAGAATTTGATGAAGAGCATCGAGGCCATGAGTAAGTTCAGAGAGAGCCAGTTTGACATCGTTAAGGCCGGTGAAGCAGCTATTTCTGAGGTCATATCGGTTAATCCCGTTTTTCTGAATGCTGGAATTCTTTCTCCTACTGGATTTGTGATGAACATGCAACCTTCTGAGGCAGAGGCGGGATTTAATATTAGGTTGCCGCCTTTTGCCGATCCTGATCTTATTAGGAGAAGAATTGCTGACGAATGGGCGCCTGCTTGGAGAAACATTACATTCCAAATAATTGAGAAGGGGCTCGCAAGGGACAACATGGGTCGGCCGTTAATGACACCCACAAATGATTCCAACCCATGGTGGTCCGTTTTCCAGAAAGCCGTCTCGGATACTGGAGGAAAGCTTTCAAAGCCCGAAATACTGTCTTCAACTACTGATGCCCAGTTCATGAGACAGTTGGGAATCCCTGCACTTGGTTTCTCTCCCATGATTAATTATCCTATCTTAATCCATCATCATAATGAGTTCTTGACAGATGCCACATTTTTTAATGGCATAAAGGTTTATGAATCCATAATCAGTGCTCTGAGTTCTTCCGGGAGGCAGCCTCCGAGTAATTTATACTTGCAGCGTTGTATGGTAGTTCATTTACCAAAAATGCCCAGTTCACTGTGA 2736 43.57 MAEEAQENDTPKSVVKEEAATHDIESQIQSAMRSRVSYFKEQADSLTLEKVRRLLEKDLGLEIYALDKHKRYIKQSLEKYLDGSHDTHASKNSVETGGERVMKGEAAESLEEHRSKKDVKEPCSEDEEETKDSPVMGLLIGHKQAKLNAEEIKNNDSKGVPSEITIKKAIKKRASYFKANSHKVTMTEVRRLLEDDLKIDEHTLDPCKKLISQQVEEILSSSEVPKSAPVGKKKSDSKASKKVTSKESSDSADSESGENEGDEEKPKRKTIPKGKMQKSDGLKKRKRPMAETVTVKKQSKSARPAVEDDIDEDGGNVSEDGQSQSSGEKPVKKKEVSTPAYGKRVEHLKSVIKSCGMSVPPSVYKKVKQVPENKREAQLIKELEEILSKEGLSSNPSEKEIKEVKKKKERAKELEGIDTSNIVSSSRRRSTTSFVSPPKPKIEVESDSDDSEEEEEDDDDDDEVDEDNDNNEEDEDVEDNGDGSQSEEEVNEEEDTPITRFRQYSAAISFLKFQAQSLDLQTLNSTIRYNKTTPRRNLARVKPLPSLRSVQLAHRFRPDRIFQVDPPSLRRRPILNGKIFPRGTQDDKCIGVQYMEAIRNLKRRNCYPVRTIHVSYVPDEEIGGFDRISKFVELFEFKNLNVGFVMDEGQASPGDEYRVFYADRTPWDLIIRAKGTPGHGSRMYYNSAMENLMKSIEAMSKFRESQFDIVKAGEAAISEVISVNPVFLNAGILSPTGFVMNMQPSEAEAGFNIRLPPFADPDLIRRRIADEWAPAWRNITFQIIEKGLARDNMGRPLMTPTNDSNPWWSVFQKAVSDTGGKLSKPEILSSTTDAQFMRQLGIPALGFSPMINYPILIHHHNEFLTDATFFNGIKVYESIISALSSSGRQPPSNLYLQRCMVVHLPKMPSSL 911
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9183973 9189626 - Conep17aG0130700.1 Cone17ag1276 456753

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1276 911 MobiDBLite consensus disorder prediction 229 253 - -
Cone17ag1276 911 NCBIfam N-acyl-aliphatic-L-amino acid amidohydrolase 503 885 IPR010159 GO:0004046(InterPro)|GO:0005737(InterPro)|GO:0006520(InterPro)
Cone17ag1276 911 Pfam Peptidase dimerisation domain 670 771 IPR011650 -
Cone17ag1276 911 Pfam Peptidase family M20/M25/M40 576 881 IPR002933 GO:0016787(InterPro)
Cone17ag1276 911 SUPERFAMILY Bacterial exopeptidase dimerisation domain 669 774 IPR036264 -
Cone17ag1276 911 PANTHER HIRA-INTERACTING PROTEIN 3 1 494 IPR037647 GO:0005634(PANTHER)
Cone17ag1276 911 Pfam Histone chaperone domain CHZ 409 441 IPR019098 -
Cone17ag1276 911 SUPERFAMILY Zn-dependent exopeptidases 575 883 - -
Cone17ag1276 911 MobiDBLite consensus disorder prediction 395 416 - -
Cone17ag1276 911 Gene3D - 669 775 - -
Cone17ag1276 911 MobiDBLite consensus disorder prediction 386 498 - -
Cone17ag1276 911 FunFam Aminoacylase-1, putative 805 886 - -
Cone17ag1276 911 MobiDBLite consensus disorder prediction 418 437 - -
Cone17ag1276 911 MobiDBLite consensus disorder prediction 326 342 - -
Cone17ag1276 911 MobiDBLite consensus disorder prediction 101 133 - -
Cone17ag1276 911 MobiDBLite consensus disorder prediction 80 136 - -
Cone17ag1276 911 MobiDBLite consensus disorder prediction 447 494 - -
Cone17ag1276 911 MobiDBLite consensus disorder prediction 260 293 - -
Cone17ag1276 911 FunFam aminoacylase-1 isoform X1 668 779 - -
Cone17ag1276 911 SMART CHZ_2 408 443 IPR019098 -
Cone17ag1276 911 MobiDBLite consensus disorder prediction 1 27 - -
Cone17ag1276 911 Gene3D - 805 886 - -
Cone17ag1276 911 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 160 220 IPR014876 -
Cone17ag1276 911 MobiDBLite consensus disorder prediction 1 23 - -
Cone17ag1276 911 Gene3D Zn peptidases 558 668 - -
Cone17ag1276 911 MobiDBLite consensus disorder prediction 218 342 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1276 K14677 - - vvi:100257526 504.212
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1276 Cone-Chr17:9183973 Cone3ag1255 Cone-Chr3:31384319 6.70E-122 dispersed
Cone17ag1276 Cone-Chr17:9183973 Cone20ag0450 Cone-Chr20:2294276 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g310 . . . . . . . . . . Cma02g00306 . Car02g00185 . . . . . . . . . . . . . . . . . . . . Cone17ag1276 . . . . . . . . . . . . . . Cmo02g00300 . . . . . . Cpe05g01333 . . . . . . . Cla02g01055 Cam02g1127 Cec02g1131 Cco02g1169 Clacu02g1115 Cmu02g1078 Cre02g1382 . . . Cme11g01027
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0030120 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 2