Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag1306 | ATGCAGGCTTTTGGCTGCCTTTTCCTTTTATCTCTTTTATTAATCTTCTCTTCCTCCTCTTCGTATGCTCTCTCCCATGCGGAAGCTTCATATATCGCACGCCGGCAGTTATTGACCTTGGACGAGACTCATCACAACTTGGATCATCACATAAATGAGACTTTTGTAAATGACAGGCTTAGAGGGGCCTACATTGCTCTCCAAGCATGGAAAAAGGCTATTTATTCGGACCCGTTTAACACGACAGCTAATTGGGTCGGTACCGATGTTTGTGCATATTCGGGGGTTTTTTGTGCGGAGGCGCTTGATGACCCGAAAGTGACTGTTGTGGCGGGAATTGATCTTAACCATGCTGACATCGCCGGTTACCTTCCCATTGAGTTGGGCTTATTAACGGACATTGCATTGTTTCATATCAATACAAACAGGTTTTGTGGGATCATTCCTAGGACTTTCTCGAACCTCAAGCTTCTTTTCGAGCTCGATGTTAGTAATAATCGGTTTGTGGGTCCATTCCCTACGGTTGTGTTAGAGCTTCCGACCCTTTCGTATCTTGACCTTAGATACAACAATTTTGAAGGTTGTTTGCCGGAAGAACTCTTTAATAAACAAATGGATGCCATCTTCTTGAACAACAATAGGTTTTCTTGCTCTATTCCGGAAACTATTGGAAACTCCTCGGTATCGGTCTTAGTCGTTGCCAATAACCATTTTACCGGGTGTATTCCGAGCAGCATTGGCAAAATGGAAAACACGTTGAACGAGATTATCTTCTTGAACAATGAATTTGTAGGATGTCTACCTCAAGAGATCGGCATGCTTGGAAATGTATCGGTGTTTGATATCGGGAATAACAATATCAGTGGACTCTTGCCCAAGACATTGAGTGGTCTTAAGAAGGTAGAACAGTTGGATGTCTCAAAGAATGTTTTCACCGGATTTGTTAATGAGAGCCTTTGCCAGTTGCCTAAATTGATCAACTTCACATTTTCTTACAACTATTTCAACGGGGAAGCTAAACAATGTAAGCCATGGTCAAGAAGGGGAGTTCTGTTGGATGATGTAAGCAATTGTTTACCGGATAGACCTAAACAAAAGCAGGAAAAGGAATGTACTCCAGTTGTGAGCAAGCCGGTCGATTGTGGGAAAGGGTTGTGTGGTGGCCGGCCGTCCCCATCACAGGTCAGTCCTACCCCGAACCCGCATCCTAACCCACCAAAACCACAACCTCCATCACCACCTGTAGCTCACTCTCCGGAGCCAACTCCAGGACACCCTTCACCTCCATCACCAGTTAATCCTACCCCGAACCCACAACCTCCATCACCACCTGTAGCTCCCTCTCCGAAGCCAACTCCAGAACACTCTTCACCACCAATCATACCGTCACCAGAGGATGAGCCCGAGCCTCCGAAACCATCAGCACCAGTTCCAAAATCGTCATTTGATGCTCCGGCACCTTCACCAACAGATGACCCAATTAAGGTATCACCGAGGCCTAGGACATCACCGGTTGAGACGCCACTGCCTCCAGTTCCCTCTCCCCCGCTACCACCTGTTCAATCCCCACCACCTCCGGTCCGCTCCCCACCGCCTCCGGTCCGCTCCCCACCTCCCGTTCAGTCACCCCTGCCCCCAGTCTACTCTCCACCGCCACATCCCATTCAGTCACCCCCGCTACCACCTGTTCATTCCCCACCACCTCCGGTTCAATCCCCACCGCCTCCGGTCCACTCCCCACCTCCCATTCAGTCACCCCCGCCTCCAGTCTACTCTCCACCGCCACCTCCCGTTCAGTCACCCCCGCCTCCGGTCTACTCTCCACCGCCACCTCCCGTTCAGTCACCCCCACCTCCGGTCTACTCTCCACCTCCACCTCCACCTCCCGTTCAATCACCTCCGCCTCCGGTCCACTCTCCACCGCCACCTCCCATCCAGTCACCCCCGCCCCCTCCCGTTCAGTCACCCCCGCCTCCAGTTCACTCTCCACCGCCACCTCCCATTCAGTCACCCCCGCCTCCGGTTCACTCTCCCCCGCCACCTCCCGTTCAATCATCCCCACCACCACCTCCATTTCAATCACCCCCACCACCAATTCAGTCTCCATCGCCACCTCCCGTTCAATCACCCCCACCACCACCTGCCGTTCATTCACCCCCACCACCGGTGAACTCACCACCACCACCTGTGCACTCCCCACCTCCTCCTTCCCCATCTCTTTCACCTCCTCCTCCTGTTTTCTCACCACCACCTCCTACGGAAGATATAATCCTACCACCCAATTTCGGCTCATCGTACATGTCCCCTCCTCCTCCAATATTCGCCGGTTACTAA | 2334 | 51.89 | MQAFGCLFLLSLLLIFSSSSSYALSHAEASYIARRQLLTLDETHHNLDHHINETFVNDRLRGAYIALQAWKKAIYSDPFNTTANWVGTDVCAYSGVFCAEALDDPKVTVVAGIDLNHADIAGYLPIELGLLTDIALFHINTNRFCGIIPRTFSNLKLLFELDVSNNRFVGPFPTVVLELPTLSYLDLRYNNFEGCLPEELFNKQMDAIFLNNNRFSCSIPETIGNSSVSVLVVANNHFTGCIPSSIGKMENTLNEIIFLNNEFVGCLPQEIGMLGNVSVFDIGNNNISGLLPKTLSGLKKVEQLDVSKNVFTGFVNESLCQLPKLINFTFSYNYFNGEAKQCKPWSRRGVLLDDVSNCLPDRPKQKQEKECTPVVSKPVDCGKGLCGGRPSPSQVSPTPNPHPNPPKPQPPSPPVAHSPEPTPGHPSPPSPVNPTPNPQPPSPPVAPSPKPTPEHSSPPIIPSPEDEPEPPKPSAPVPKSSFDAPAPSPTDDPIKVSPRPRTSPVETPLPPVPSPPLPPVQSPPPPVRSPPPPVRSPPPVQSPLPPVYSPPPHPIQSPPLPPVHSPPPPVQSPPPPVHSPPPIQSPPPPVYSPPPPPVQSPPPPVYSPPPPPVQSPPPPVYSPPPPPPPVQSPPPPVHSPPPPPIQSPPPPPVQSPPPPVHSPPPPPIQSPPPPVHSPPPPPVQSSPPPPPFQSPPPPIQSPSPPPVQSPPPPPAVHSPPPPVNSPPPPVHSPPPPSPSLSPPPPVFSPPPPTEDIILPPNFGSSYMSPPPPIFAGY | 777 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 9298742 | 9301485 | - | Conep17aG0133800.1 | Cone17ag1306 | 456783 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag1306 | 777 | MobiDBLite | consensus disorder prediction | 360 | 777 | - | - | |
Cone17ag1306 | 777 | Pfam | Leucine Rich Repeat | 182 | 202 | IPR001611 | GO:0005515(InterPro) | |
Cone17ag1306 | 777 | Pfam | Leucine rich repeat | 276 | 333 | IPR001611 | GO:0005515(InterPro) | |
Cone17ag1306 | 777 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 8 | 669 | IPR051582 | - | |
Cone17ag1306 | 777 | SUPERFAMILY | L domain-like | 65 | 340 | - | - | |
Cone17ag1306 | 777 | MobiDBLite | consensus disorder prediction | 503 | 757 | - | - | |
Cone17ag1306 | 777 | PRINTS | Proline rich extensin signature | 405 | 421 | - | - | |
Cone17ag1306 | 777 | PRINTS | Proline rich extensin signature | 391 | 403 | - | - | |
Cone17ag1306 | 777 | PRINTS | Proline rich extensin signature | 429 | 441 | - | - | |
Cone17ag1306 | 777 | PRINTS | Proline rich extensin signature | 442 | 463 | - | - | |
Cone17ag1306 | 777 | Gene3D | Ribonuclease Inhibitor | 64 | 349 | IPR032675 | - | |
Cone17ag1306 | 777 | FunFam | Leucine-rich repeat extensin-like protein 1 | 64 | 225 | - | - | |
Cone17ag1306 | 777 | MobiDBLite | consensus disorder prediction | 394 | 483 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone16ag0754 | Cone-Chr16:8541821 | Cone17ag1306 | Cone-Chr17:9298742 | 3.56E-38 | dispersed | |
Cone17ag1306 | Cone-Chr17:9298742 | Cone4ag1548 | Cone-Chr4:11925894 | 4.45E-57 | dispersed | |
Cone5ag1503 | Cone-Chr5:10171994 | Cone17ag1306 | Cone-Chr17:9298742 | 4.50E-57 | transposed | |
Cone17ag1306 | Cone-Chr17:9298742 | Cone20ag0166 | Cone-Chr20:717390 | 1.80E-112 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag1306 | - | - | - | 0.0 |