Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1313 ATGGCTTCAACTTCTTTTCTAGCTTCCATTTCTCTGCAACCACAACAACTACACTTTCTATCACCCAAAAAATCAAAACAGAGCTTCCCTGTCCGTCACATCGTCGCCTCAATATCTGAAAGGCCTTCTGTACCATCATCCTCTCCGGTGACAGTGCCGCCTCCTGAACCGGCGACCAAGCTATCAATAAGAAAAATCCCAGGCGGTTACGGCCTTCCTTTTGTCGGTCCGATCAAAGACAGGCTTGACTATTTCTATGACCAAGGCAGAGACGAGTTCTTCAAATCACGCATCCAGAAGTATCAATCGACTGTGTTTCGAGCTAACCTCCCGCCAGGTCCCTTCATCGCGTCGGATCCTCGCGTCATAGTTTTACTCGACGGAAAGAGTTTTCCGGTGCTCTTCGACTTGAGTAAGGTCGAGAAGAAAGATTTATTTACAGGAACCTTCATGCCGTCGACCGAATTCACCGGCGGTTACCGAGTCCTTCCGTACCTTGATCCGTCGGAGCCTAATCACGGCAAGCTGAAACGACTCATGTTCTTCCTCCTCATGTCTCGCCGGGACGAGGTCATACCGGAGTTCCATTCCACCTATACAGAGCTGTTTGAAACTCTCGAAAGTGAGCTGGCGGCTCAAGGTAAAGCTAACTTCGGCTCAGCCAATGATCAAGCCGCTTTCACTTTCTTAGCGCGCTCTCTATTTGGAACAAACCCGGCGGATACCAAACTCGGTCAAGATGGGCCGGGTCTGGTGGGAAAATGGGTTTTATTTCAGCTCAGTCCATTACTCACTTTGGGCCTCCCTAAGCTTCTAGAAGACCTTCTGATCCACACTTTCCCTCTTCCTCCATTCCTCGTGAAGGCTGATTACCGGAAGCTCTACGATTTCTTCTACGCATCCTCTGGATTTGTTCTAGACGAAGCGGAGAGGTTAGGGATTTCTAGAGATGAAGCTTGTCACAATCTGTTATTCACCACGTGCTTCAATTCATTCGGAGGGATGAAGATTTTCTTCCCTAACATGCTGAAATTGATTGGACGAGCTGGGGTCAAGCTCCACACTCAGCTGGCGGAGGAGATCAGATCCGCCGTCAGATCCGACGGCGGTAAAGTCACCATGGCCGGCATGGAACAGATGCCGTTGATGAAGTCCGTAGTTTACGAGACGTTACGGATCGAACCTCCCGTTCCGTTACAGTACGGGAAAGCGAAGAGAGACTTCGTGATCGAGAGCCACGACGCGGCGTTTCCGGTGAAGGAAGGGGAGATGATTTTCGGATACCAGCCGTTCGCTACTAAGGATCCGAAAATATTCGATAGATCCGAAGAGTTCGTTCCGGATCGGTTCGTCGGCGAGGAGGGGGAGGATATGCTGAAGTACGTGCTCTGGTCAAACGGACCGGAGTCGGAGACCCCTACCGTTGCGAATAAACAATGTGCCGGGAAAGATTTCGTAGTTCTGGTCTCGAGATTGCTAGTCGTGGAATTGTTCTTGCGGTATGATTCGTTCGAGATCGAAGTCGGATCGTCACCGTTGGGAGCTGCAGTTACTCTCACTTCACTCAAGAGAGCTAGTTTTTGA 1584 50.19 MASTSFLASISLQPQQLHFLSPKKSKQSFPVRHIVASISERPSVPSSSPVTVPPPEPATKLSIRKIPGGYGLPFVGPIKDRLDYFYDQGRDEFFKSRIQKYQSTVFRANLPPGPFIASDPRVIVLLDGKSFPVLFDLSKVEKKDLFTGTFMPSTEFTGGYRVLPYLDPSEPNHGKLKRLMFFLLMSRRDEVIPEFHSTYTELFETLESELAAQGKANFGSANDQAAFTFLARSLFGTNPADTKLGQDGPGLVGKWVLFQLSPLLTLGLPKLLEDLLIHTFPLPPFLVKADYRKLYDFFYASSGFVLDEAERLGISRDEACHNLLFTTCFNSFGGMKIFFPNMLKLIGRAGVKLHTQLAEEIRSAVRSDGGKVTMAGMEQMPLMKSVVYETLRIEPPVPLQYGKAKRDFVIESHDAAFPVKEGEMIFGYQPFATKDPKIFDRSEEFVPDRFVGEEGEDMLKYVLWSNGPESETPTVANKQCAGKDFVVLVSRLLVVELFLRYDSFEIEVGSSPLGAAVTLTSLKRASF 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9317475 9319286 - Conep17aG0134500.1 Cone17ag1313 456790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1313 527 CDD CYP74 95 520 - -
Cone17ag1313 527 FunFam Allene oxide synthase, chloroplastic 61 527 - -
Cone17ag1313 527 Gene3D Cytochrome P450 61 527 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone17ag1313 527 SUPERFAMILY Cytochrome P450 64 509 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone17ag1313 527 PRINTS E-class P450 group IV signature 433 451 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone17ag1313 527 PRINTS E-class P450 group IV signature 380 396 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone17ag1313 527 PRINTS E-class P450 group IV signature 480 498 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone17ag1313 527 Pfam Cytochrome P450 355 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone17ag1313 527 PANTHER CYTOCHROME P450 26 65 501 - GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1313 Cone-Chr17:9317475 Cone3ag1324 Cone-Chr3:32186773 8.77E-130 dispersed
Cone12ag1126 Cone-Chr12:9073403 Cone17ag1313 Cone-Chr17:9317475 2.19E-181 wgd
Cone17ag1313 Cone-Chr17:9317475 Cone20ag0160 Cone-Chr20:698999 0 wgd
Cone17ag1313 Cone-Chr17:9317475 Cone4ag1880 Cone-Chr4:13437908 1.30E-292 wgd
Cone17ag1313 Cone-Chr17:9317475 Cone7ag1789 Cone-Chr7:11734720 2.49E-290 wgd
Cone17ag1313 Cone-Chr17:9317475 Cone8ag1170 Cone-Chr8:10108017 5.25E-194 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1313 K01723 - cit:102578025 754.977