Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone17ag1331 | ATGCATCTTCTTCTACTACTTTCTCTTCCTCTTCTCCTGCTCCTCAAGTTTCTCTACTCAACCATATGGGTCCCACGCACGATCCAACGCCATTTCCAAACGCAAGGAATAAGAGGCCCTGGCTACCGTCCGATCTTCGGCAACAGCGCCGAGATCCGCCGTATATACGCGGAAGCTCAGTCAAAGCCAATCATTCCCTTTGACCACGACATACTTAAACGGGCCGCTCCGTTTTATCACCGGTGGTCGGAAATGTATGGCAAAACTTTTCTTTACTGGTTCGGGTTGACGCCCAGGTTAGCTTTATCCGACCCGGATATGATCAAAGAGGTCCTTACGAATACCAGCGGGTCGTTTAGAAAGATCCGGCATAATCCTTTGTCCAAGAAGCTTTTTGCAGAAGGCCTTGTTGGGCTCGAAGGTGAAACATGGGCCGTTCATCGAAGAATCGCCAACCAGGCCTTCACCATTGAGCGTATTAAGGGCTGGGTTCCTGAAATGGCTGCTAGTGTTTCTAAGATGATGGAGAAGTGGGAAGAAGTACGAGAAGGAAAAGAAGAATTCGAAATGGACGTGCATAAAGAATTTCATCAGCTCTCAGCTGATGTCATTTCAAGAACAGCTTTTGGAAGTAGTTTTGAGGAGGGACAACGGATTTTCAATCTGCAAGAGGAGCAAATGCATCTGTTTTCAAAAGCAATCAGAAGCGTCTACATTCCTGGATTCAGATTTTTGCCTACGAAGAATAACAAAGAGAGGTGGAGACTAGAGACCGAAACTCACCGATCGATTAAGGCGTTGATCGAGAATAACAGCAAGGAAAAGGGAAACACGACGAACCTTCTCGGGCTACTAATGTCATGCTACAAGAATCAAGAAGGCGAAGAAGAAAGGCTCGGGTTGGAGGAGATAATAAATGAATGCAAGACCTTTTACTTTGCAGGAAAGGACACTACTGCTAATCTCTTAACCTGGGCATTTCTACTTCTAGCATTGCATCAAGAATGGCAAATCAAGGCTCGAGAAGAAGTTTTTTGCGTGTTCGGACAAGGAAACGAACATCTGCCCACAGCTGACAAATTGAATGACCTTAAGATTGTAAGCCAATCCATTGTCCCTCATTATGGTTTTTTCTGTTTCATACAGTTAATTCTGTAA | 1158 | 44.99 | MHLLLLLSLPLLLLLKFLYSTIWVPRTIQRHFQTQGIRGPGYRPIFGNSAEIRRIYAEAQSKPIIPFDHDILKRAAPFYHRWSEMYGKTFLYWFGLTPRLALSDPDMIKEVLTNTSGSFRKIRHNPLSKKLFAEGLVGLEGETWAVHRRIANQAFTIERIKGWVPEMAASVSKMMEKWEEVREGKEEFEMDVHKEFHQLSADVISRTAFGSSFEEGQRIFNLQEEQMHLFSKAIRSVYIPGFRFLPTKNNKERWRLETETHRSIKALIENNSKEKGNTTNLLGLLMSCYKNQEGEEERLGLEEIINECKTFYFAGKDTTANLLTWAFLLLALHQEWQIKAREEVFCVFGQGNEHLPTADKLNDLKIVSQSIVPHYGFFCFIQLIL | 385 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 17 | 9379129 | 9381023 | - | Conep17aG0136300.1 | Cone17ag1331 | 456808 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone17ag1331 | 385 | PRINTS | E-class P450 group I signature | 83 | 102 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag1331 | 385 | PRINTS | E-class P450 group I signature | 303 | 320 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag1331 | 385 | PRINTS | E-class P450 group I signature | 323 | 349 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag1331 | 385 | PRINTS | E-class P450 group I signature | 199 | 217 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag1331 | 385 | SUPERFAMILY | Cytochrome P450 | 63 | 368 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag1331 | 385 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 11 | 368 | IPR050665 | GO:0004497(PANTHER) | |
| Cone17ag1331 | 385 | Gene3D | Cytochrome P450 | 22 | 371 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone17ag1331 | 385 | Pfam | Cytochrome P450 | 79 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone17ag1331 | Cone-Chr17:9379129 | Cone7ag0654 | Cone-Chr7:3350799 | 4.32E-95 | dispersed | |
| Cone20ag0146 | Cone-Chr20:655864 | Cone17ag1331 | Cone-Chr17:9379129 | 2.69E-46 | transposed | |
| Cone17ag1331 | Cone-Chr17:9379129 | Cone20ag0145 | Cone-Chr20:654435 | 4.63E-74 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone17ag1331 | - | - | - | 0.0 |