Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1382 ATGTCGGATTGGGAATGCACCAAAGAAAACACCATCTTCCTCAAAAATGCCTCACACGACCGTGTCTCCTCCCCTGCTTCCTATAAATTTGATAGGGTATTTGGATGCGAATCCTCAACAAAGCAGGTGTATGAAGAGGGAGCCAAAGAAGTTGCTCTCTCTGTTCTAAGTGGAATCAACTCTACGATTTTTGCATATGGGCAAACCAGCAGTGGGAAGACATATACAATGAGTGGAATTACAGAGTACTCAGTAACAGATATTTATCATTACATAGAGATGCAAAAAGAGAGAGAGTTTGTGATCAAGTTTTCTGCTATCGAAATCTATAATGAAGCTGTTCGAGACCTGTTGGGATCGGAACACGCTCCTCTTCGACTTCTAGATGATCCGGAGAAAGGTGTCAAAATCGATAAACTCACAGCGGAGACTGTGAAAGATTTGAGCCATCTGCAGGCACTCCTCTACTTCTGTGAATCCCAAAGAAAGATAGCAGAGACCTCTCTGAATGAAACCAGCTCCAGATCTCATCAAATTCTGCGAATGACTGTTGAAAGCTCTCCTAGAAAATATCCAGGGTCCAAAAGTTCAGGCATGCTTGCAGCTACTTTGAATTTTGTTGATCTTGCTGGAAGTGAGCGTTCTTCTCATACAATGTCAGTTGGTTTAAGACTAAAAGAAGGCAGCCACATAAATCGCAGTTTGCTAACCCTTGGAACCGTAATTCGCAAATTAAGCAAAGGAAGAAATGGACACATACCTTACCGAGATTCAAAGCTTACACGAATACTTCAGAATTCATTGGGGGGTAATGCTAGGACGGCTGTGATTTGCACGATAAGCCCGGCCAGCAGTCATGTTGAGCAATCCAAAAACACACTCTTCTTTGCAACTTGTGCAAAAGAGGTCACTACTAATTCAATGGTCAATGTAGTAATGTCAGACAAGCAATTGGTGAAGCAGTTGCAGAAGGAACTGGCTAAACTTGCAGGAGAGCTTAAGAGCTTAGGATCAAGCATTAACACTAGTGATTCTGCTGCATTGCTTAGAGAGAAAGAACTTCTAATCGAAAAGATGGATAAAGAGATGAAAGAGTTGGCTTGGCAAAGGGATCTTGCCCAATCCCGGGTTGAGCATTTACTACAAACTGTTGGAGAAGATCGTTTTTCAAAACTAGATGAAGACTCAGTCTCGGCATTTTCAGATGTCGAGTCGGTCCATCTTGATTCTGTGGGTCTCAATACTTTCAAGAATTTCTACATGAGAGACAGAGAAGTTAATCATCCTAAGATGGATTCACCTGTTTCCGTTGAACAAGAAGCCCACTTTCTACTGGAAGAAATTTCTCTGAGATATTCTGGAGTCGACCTGAGTGAAGCGATTGCTCATACAGATGAAGTATATTCAGAGGAGATTGTTAAGGAAGTCCAATGCATTGAAACAGAGGACCCAGAGTCCAAGCAAAGAGCTGAAGATGGTTTTGATCTATTGCCACCTGATCCTGAAGAAAATGAAGAAACGACAACTCGAATTTCGACCCAAGAAGAGGAGAACATGGAACAGCAGCTCATTGATATTCCTACTGACCAAACTTATGGTTCTTTAGACCTACAAGTTGATGAAATGCAAAAGACAATAAGCAGCCTTGAAACAGACTATCCTTCTGAACCCGTGGTGTCTAGCTCTCGTGGCAGGGGATTGACTAGGGTCGGAAGCAGCAGGTCTGTTTTCATGACCATTCAAGCTTCTCCTTGGTCTGAGAATGCAGACCATGATGAGAATCGACCAACTGGATTGTCTGACAGGGACTCCTCAAGAAAAAAACTGGATGTTGTGCTTCAAGGAAAGCCATTCCGGTCAAAGTACGAAGTCAACAGCCGGAAACTTGGCAGAAGAGACAATAGTGATTATGCTAGAAGTGTTTGTACAGATGTAAGAGTTGCTAGAGAGTGGGAAGAAGACGATAATGCTAGCGTCTTAAATTTCGAAACAGGAAATAAGAGAAGAGCAAAGAAGCAATCAAACAGATATCTTTTAAGAGAAGGAACTGAATTGGATGGATCTAGACAAAGAGGAGGAGAAGATGGTTATTCAAACCGATTACAGAGATCAGAACTGCAGTTTAGTTGGCTGTGGGAATTTGAAAGACAGAGGAAAGAAATAATCGAGCTATGGGATTCATGCAACGTGCCATTAGTAGACAGAACATACTTTTTCATTATCTTCAAAGGTGGACCTTCTGATTCTGTGTACATGGAAGTAGAGCTTCGAAGGCTGTCGTTCATAAGAGATACATTTTCTGGAAAAGCTCAAGTGGCCAAAGATAAGAACAGTAGTAGTTCAGTGACTAGAGGTTCAAGTATGAAGGCTTTAAACAAGGAGAGAGAAATGCTGAGCAAGAGAGTGAAGAAGAAGATGTCTACAAGGGAAAGAGAGGCGCTTTATCAGAAATGGGGGATAATGTTGAAATCGAAAGAGAGGAGCCTGCAAGTGGCAAGACGGGTTTGGACAAGCACACAAGACTTGGAGCATATAAAGGAGAGTGCTGCCCTCGTGGCCAAACTGATTGGTTTTTCCGAATCAAACGAGGCTCCGAGAGGGTTGTTCGGTATAAGCTTCTTGCCTAAACCTTCAAAGAAACCATTTAGCTGGAGATATCATTAG 2664 42.3 MSDWECTKENTIFLKNASHDRVSSPASYKFDRVFGCESSTKQVYEEGAKEVALSVLSGINSTIFAYGQTSSGKTYTMSGITEYSVTDIYHYIEMQKEREFVIKFSAIEIYNEAVRDLLGSEHAPLRLLDDPEKGVKIDKLTAETVKDLSHLQALLYFCESQRKIAETSLNETSSRSHQILRMTVESSPRKYPGSKSSGMLAATLNFVDLAGSERSSHTMSVGLRLKEGSHINRSLLTLGTVIRKLSKGRNGHIPYRDSKLTRILQNSLGGNARTAVICTISPASSHVEQSKNTLFFATCAKEVTTNSMVNVVMSDKQLVKQLQKELAKLAGELKSLGSSINTSDSAALLREKELLIEKMDKEMKELAWQRDLAQSRVEHLLQTVGEDRFSKLDEDSVSAFSDVESVHLDSVGLNTFKNFYMRDREVNHPKMDSPVSVEQEAHFLLEEISLRYSGVDLSEAIAHTDEVYSEEIVKEVQCIETEDPESKQRAEDGFDLLPPDPEENEETTTRISTQEEENMEQQLIDIPTDQTYGSLDLQVDEMQKTISSLETDYPSEPVVSSSRGRGLTRVGSSRSVFMTIQASPWSENADHDENRPTGLSDRDSSRKKLDVVLQGKPFRSKYEVNSRKLGRRDNSDYARSVCTDVRVAREWEEDDNASVLNFETGNKRRAKKQSNRYLLREGTELDGSRQRGGEDGYSNRLQRSELQFSWLWEFERQRKEIIELWDSCNVPLVDRTYFFIIFKGGPSDSVYMEVELRRLSFIRDTFSGKAQVAKDKNSSSSVTRGSSMKALNKEREMLSKRVKKKMSTREREALYQKWGIMLKSKERSLQVARRVWTSTQDLEHIKESAALVAKLIGFSESNEAPRGLFGISFLPKPSKKPFSWRYH 887
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9583594 9587297 + Conep17aG0141700.1 Cone17ag1382 456859

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1382 887 ProSiteProfiles Kinesin motor domain profile. 1 303 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag1382 887 PANTHER CENTROMERE PROTEIN E 2 880 IPR027640 GO:0003777(InterPro)|GO:0007018(InterPro)
Cone17ag1382 887 SMART kinesin_4 1 311 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag1382 887 Pfam Kinesin motor domain 14 303 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag1382 887 CDD KISc_CENP_E 2 303 - -
Cone17ag1382 887 MobiDBLite consensus disorder prediction 588 608 - -
Cone17ag1382 887 ProSitePatterns Kinesin motor domain signature. 202 213 IPR019821 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)
Cone17ag1382 887 Coils Coil 312 339 - -
Cone17ag1382 887 Gene3D Kinesin motor domain 3 333 IPR036961 -
Cone17ag1382 887 Coils Coil 349 376 - -
Cone17ag1382 887 Coils Coil 788 808 - -
Cone17ag1382 887 PRINTS Kinesin heavy chain signature 253 274 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag1382 887 PRINTS Kinesin heavy chain signature 58 79 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag1382 887 PRINTS Kinesin heavy chain signature 203 221 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag1382 887 PRINTS Kinesin heavy chain signature 167 184 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone17ag1382 887 FunFam Putative inactive kinesin-like protein KIN-7B 160 320 - -
Cone17ag1382 887 MobiDBLite consensus disorder prediction 581 608 - -
Cone17ag1382 887 Pfam Domain of unknown function (DUF3490) 713 875 IPR021881 -
Cone17ag1382 887 MobiDBLite consensus disorder prediction 480 496 - -
Cone17ag1382 887 MobiDBLite consensus disorder prediction 480 518 - -
Cone17ag1382 887 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 340 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1382 K11498 - - rcu:8275819 813.527
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1382 Cone-Chr17:9583594 Cone5ag1528 Cone-Chr5:10466667 1.32E-159 dispersed
Cone12ag1189 Cone-Chr12:9374447 Cone17ag1382 Cone-Chr17:9583594 3.59E-216 wgd
Cone17ag1382 Cone-Chr17:9583594 Cone6ag1670 Cone-Chr6:12695803 2.76E-209 wgd
Cone17ag1382 Cone-Chr17:9583594 Cone8ag1236 Cone-Chr8:10394395 2.56E-210 wgd
Cone17ag1382 Cone-Chr17:9583594 Cone9ag1592 Cone-Chr9:11412526 1.81E-206 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1046 . . . . . . . . Cmo05g00291 Cmo12g00378 . . . Car12g00404 . . Cpe07g00383 Bhi04g00228 . . . . . . Cla08g01443 Cam08g1924 Cec08g1499 Cco08g1635 Clacu08g1614 . Cre08g1400 . . Cone17ag1382 . . . . Cme03g01903 . Blo18g00788 . . . . Bma01g00738 . . . . Cma12g00427 Cma05g00285 Car05g00235 . Cpe11g00236 . . . . . . . . . . . . . . . Lsi08g01346 Csa02g02109 Chy03g01407 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008666 0 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 0 1 1 1 1 1 32