Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1415 ATGAGAACATCTTCAAATTATACAAATATTCTTCGCATTGTTTTTCTTTACCTTATGTTCTCATCTTGCTATGGGAACAGTGATTTGGAAGCGCTATTGAAGCTCAAGGCAGGCATGACAGGGCCGAAAGGACACGGTCTTGAAGATTGGAAACCGTCACCGTCTTCATCGGCACACTGCTCGTTTTCTGGCGTGATTTGCGACGGAGATTTGAGAGTTATCGCGCTGAACGTTTCGCATGTTCCTTTATTCGGCTCGATTCCGCCGGAGATTGGAGTTCTGGACAAGCTCGTGAATCTCACGATAGCTTATGATAATCTCACTGGAAAGCTTCCTGGAGAAATGGCGAAGCTCACTGCTCTCAAGTTCCTCAATGTCTCCAACAACGCCTTCCATGGCAACTTTCCAGATGAAATTTTAGTTGTAATGACGGAATTAGAAGTACTCGATGCTTATAACAACAACTTCTTGGGACTGTTGCCAGTCGAAGTTGCCAATCTGAAGAAGCTGAAACATCTCCATCTCGGCGGGAACTTCTTCAACGGCTCGATTCCTGAGATATATTCGGAGATGGAGAGCTTAGAGTACTTAGGCTTGAGCGGTAACTCGCTTAGTGGAAAAATTCCAGCAAGCTTGGCTAGTTTGAAGAACCTCAAGGAACTTTACGCCGGCTACTATAACTCGTACGAAGGTGGAATTCCGCCGGAGCTAGGTTCGATAACTTCTCTTCAACTTATCGATTTGGCTAACTGTGACCTTCATGGTGAAATTCCGACGAGTCTAAGCCAATTGAAGCACCTGCACACCTTGTTTCTACAAATTAACCGCCTCACCGGTCATATTCCGTCGGCACTCTCTGGCTTGGTCAGTCTCAAATCCTTGGATCTTTCCATTAACGAACTGACAGGAGAGATACCGGAGAGTTTCTCCGCTCTTGAAAACATTACGCTGATCAATCTGTTTAGAAACAAACTCCGTGGTCCAATACCGGAGTTCGTCGGAGACTTTCCGAATCTGGAAGTGCTTCAGGTGTGGGATAACAACTTCAGTCTAGAGCTCCCGCCGAATCTTGGCCAGAACGGCAAGCTCAAAGACCTTGACGTGGCTACTAACCACTTTACAGGATTGATTCCCAGGGATTTATGCAAGGGCGGGATGTTAAAGACTCTGATTCTGTTGGAGAATGCGTTTTTTGGCCCGATTCCGGAAGAACTCGGAAATTGCAAATCGCTGACTAAAATCAGAATCATGAAGAATTTCTTCAACGGGACGATTCCAGCAGGTATTTTCAATTTGCCAGAGTTGACAATGATCGAGGTAAGTGAAAACTACTTCTCAGGTGAACTCCCCTCACACATATCCGGTGACAATCTTGGACTTCTAACTCTCTCACATAACATGATCTCTGGCAAAATCCCTCCGTCTATCGGAAACTTAAAGAAACTGCAGGCTCTCTCCCTTGAAATGAACAGTCTCTCCGGTCAAATCCCGAAAGAATTATTCGATCTGAGCATGCTCTTGAAAATTAACGTCAGCGCGAACAATCTAACCGGAGAAATCCCGGATTCAATTGAAAACTGTGTTTCCTTAACATCCATTGATCTCAGTCGAAACAGCCTCGTCGGTGAAATTCCTCAAGGAATTGCAAAGTTAAATATCCTCAGCATTCTGAATTTCTCAGGAAATCACCTCACCGGCCTAATTCCAACCAAGCTTAAATCAATGACGAGCTTAACCACTCTGGATCTTTCTGATAACAACTTCTTTGGCCGACTTCCAACAGGCGGGCAGTTTTCAGTCTTCAATGACACTTCGTTTCAAGGAAATCCCAAGCTCTGTTTCCCACGTGCCGGCCCATGCCCATCTTTTACTAACCCATCAAACGACTCGACCCGTACCCATACCAAATTCGGATCCTCTAAGCTCGCCATCACTATCATCTCCATCATCGCAGCTGTTTCATTCGTCCTAGTCGCAGCTAACATTATCCGCAAGAAAAGGCTCCAGAAATCCAGGGCATGGAAGCACACTGCCTTCCAACGCCTCGATTTCAAAGCAGAAGATGTTCTCGAATGCTTGAAAGAAGCGAACATCATCGGCAAAGGCGGTGCCGGGATCGTCTACAGAGGCTCCATGCGCAACGGTGTTAATGTGGCAATCAAACGATTAGTCGGTCGCGGGTTAAACGACCATGGTTTCTCCGCCGAAATACGAACACTAGGCCAGATCCGGCACCGGAATATCGTTCGTCTTTACGGATACGTGTCCAATCAGGATACGAACTTGTTGTTATACGAGTATATGCCGAATGGGAGCTTGGGCGAGATGTTGCATGGAGCTAAAGGCGGGCATTTGCAGTGGGAAACGAGGAGTCGTATCGCTTTGGAGGCAGCTAAGGGGCTCTGTTATCTTCACCATGACTGCACTCCATTGATTATCCATAGAGATGTGAAGTCCAATAACATATTACTAGATTCTGACTTCGAGGCCCATGTTGCTGATTTTGGACTTGCTAAGTTTCTGCAAGACGCCGGAGCTTCCGAGTGCATGTCCGCTGTTGCTGGATCATACGGTTACATCGCTCCAGAGTATGCGTACACTTTAAAGGTGGACGAGAAGAGCGACGTCTACAGTTTTGGTGTTGTTTTACTGGAGTTGATTGCAGGGAGGAAACCGGTGGGGGAGTTTGGAGATGGAGTGGACATAGTAAGGTGGGTGAGGAATACTACATCGGAACTGTCTCAGCCGTCTGATGCTGCTTCGGTTTTAGCTGTGGTTGATCCCAGGCTGAGTGGGTACCCACTGACAGGTGTCATTCATCTATTCAAGATAGCTATGATGTGCGTTGAAGATGAAAGCTCTGCAAGGCCTACCATGAGGGAAGTTGTTCATATGCTCAGTAATCCTCCCCGTTCTCCTCCCAGTCTGATCTCACTCTAA 2940 46.6 MRTSSNYTNILRIVFLYLMFSSCYGNSDLEALLKLKAGMTGPKGHGLEDWKPSPSSSAHCSFSGVICDGDLRVIALNVSHVPLFGSIPPEIGVLDKLVNLTIAYDNLTGKLPGEMAKLTALKFLNVSNNAFHGNFPDEILVVMTELEVLDAYNNNFLGLLPVEVANLKKLKHLHLGGNFFNGSIPEIYSEMESLEYLGLSGNSLSGKIPASLASLKNLKELYAGYYNSYEGGIPPELGSITSLQLIDLANCDLHGEIPTSLSQLKHLHTLFLQINRLTGHIPSALSGLVSLKSLDLSINELTGEIPESFSALENITLINLFRNKLRGPIPEFVGDFPNLEVLQVWDNNFSLELPPNLGQNGKLKDLDVATNHFTGLIPRDLCKGGMLKTLILLENAFFGPIPEELGNCKSLTKIRIMKNFFNGTIPAGIFNLPELTMIEVSENYFSGELPSHISGDNLGLLTLSHNMISGKIPPSIGNLKKLQALSLEMNSLSGQIPKELFDLSMLLKINVSANNLTGEIPDSIENCVSLTSIDLSRNSLVGEIPQGIAKLNILSILNFSGNHLTGLIPTKLKSMTSLTTLDLSDNNFFGRLPTGGQFSVFNDTSFQGNPKLCFPRAGPCPSFTNPSNDSTRTHTKFGSSKLAITIISIIAAVSFVLVAANIIRKKRLQKSRAWKHTAFQRLDFKAEDVLECLKEANIIGKGGAGIVYRGSMRNGVNVAIKRLVGRGLNDHGFSAEIRTLGQIRHRNIVRLYGYVSNQDTNLLLYEYMPNGSLGEMLHGAKGGHLQWETRSRIALEAAKGLCYLHHDCTPLIIHRDVKSNNILLDSDFEAHVADFGLAKFLQDAGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGRKPVGEFGDGVDIVRWVRNTTSELSQPSDAASVLAVVDPRLSGYPLTGVIHLFKIAMMCVEDESSARPTMREVVHMLSNPPRSPPSLISL 979
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9711716 9715131 - Conep17aG0145200.1 Cone17ag1415 456892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1415 979 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Cone17ag1415 979 FunFam Leucine-rich repeat receptor-like protein kinase 25 186 - -
Cone17ag1415 979 SMART serkin_6 693 966 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag1415 979 Gene3D Ribonuclease Inhibitor 142 227 IPR032675 -
Cone17ag1415 979 Gene3D Ribonuclease Inhibitor 228 333 IPR032675 -
Cone17ag1415 979 Gene3D Ribonuclease Inhibitor 27 141 IPR032675 -
Cone17ag1415 979 SUPERFAMILY RNI-like 76 421 - -
Cone17ag1415 979 Pfam Leucine rich repeat 529 588 IPR001611 GO:0005515(InterPro)
Cone17ag1415 979 Pfam Leucine rich repeat 266 325 IPR001611 GO:0005515(InterPro)
Cone17ag1415 979 Gene3D Phosphorylase Kinase; domain 1 657 767 - -
Cone17ag1415 979 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 768 977 - -
Cone17ag1415 979 Pfam Leucine Rich Repeat 146 167 IPR001611 GO:0005515(InterPro)
Cone17ag1415 979 Pfam Leucine Rich Repeat 242 264 IPR001611 GO:0005515(InterPro)
Cone17ag1415 979 Pfam Leucine Rich Repeat 506 527 IPR001611 GO:0005515(InterPro)
Cone17ag1415 979 Pfam Leucine Rich Repeat 458 479 IPR001611 GO:0005515(InterPro)
Cone17ag1415 979 Pfam Leucine Rich Repeat 193 215 IPR001611 GO:0005515(InterPro)
Cone17ag1415 979 SUPERFAMILY L domain-like 371 616 - -
Cone17ag1415 979 Pfam Protein kinase domain 695 964 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag1415 979 ProSiteProfiles Protein kinase domain profile. 693 967 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone17ag1415 979 Pfam Leucine rich repeat N-terminal domain 26 68 IPR013210 -
Cone17ag1415 979 SMART LRR_typ_2 575 598 IPR003591 -
Cone17ag1415 979 SMART LRR_typ_2 167 190 IPR003591 -
Cone17ag1415 979 SMART LRR_typ_2 479 503 IPR003591 -
Cone17ag1415 979 SMART LRR_typ_2 336 360 IPR003591 -
Cone17ag1415 979 SMART LRR_typ_2 288 312 IPR003591 -
Cone17ag1415 979 SMART LRR_typ_2 191 215 IPR003591 -
Cone17ag1415 979 SMART LRR_typ_2 118 142 IPR003591 -
Cone17ag1415 979 SMART LRR_typ_2 264 287 IPR003591 -
Cone17ag1415 979 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 228 333 - -
Cone17ag1415 979 Gene3D Ribonuclease Inhibitor 336 623 IPR032675 -
Cone17ag1415 979 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 662 767 - -
Cone17ag1415 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 26 967 IPR050647 -
Cone17ag1415 979 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 340 624 - -
Cone17ag1415 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone17ag1415 979 SUPERFAMILY Protein kinase-like (PK-like) 686 966 IPR011009 -
Cone17ag1415 979 Gene3D Transferase(Phosphotransferase) domain 1 768 972 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1415 Cone-Chr17:9711716 Cone6ag1494 Cone-Chr6:11836339 7.53E-160 dispersed
Cone17ag1415 Cone-Chr17:9711716 Cone3ag0913 Cone-Chr3:4685111 3.10E-135 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82290 PF06200 tify 2.10E-09 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1415 - - - 0.0