Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1423 ATGAGACCCACTAATATGTTTGCACTATTACTTATGATTGCTATTTGTTCACTTTCTTCTTCGCTGAATGCACTCAGTTCGGACTACTATGAGCACACGTGCCCTCAGGTTGAGTCCATCATCGCTACCGCCGTTAAAAAAGCAACTTCGAACGACAAAACTGTTCCGGCTGCACTTCTCCGAATGCACTTTCACGATTGCTTCATTAGAGGCTGTGATAGTTCTGTGCTACTAGACTCGAAGGGGAAGAAGAAGGCAGAAAAAGACGGGCCTCCTAATATATCATTGCATGCATTTTATGTGATTGATAACGCCAAGAAAGAACTTGAAGCTTCTTGCCCTGGTGTCGTCTCTTGTGCTGATATCTTAGCGCTAGCTGCTCGTGACGCGGTCGTTCTGTCTGGAGGTCCCAATTGGGAAGTGCCAAAAGGAAGAAAGGATGGTAGAATCTCCATCGCAGACGACACCAAAAAGTTACCTTTTCCCACCTTCAACTTCTCTCAACTTCAGCAAAGTTTCGCCCAGAGAGGTCTCTCTGTTCAAGATCTCGTAGCTCTCTCAGGCGGGCATACACTTGGGTTCGCTCATTGTTCATCGTTCCAGAACAGGATCCACAATTTCAATACCAAAACTGATGTTGACCCTACACTTTCATCATCGTTTGCAGCAAGCTTAAGGACTACGTGTCCTGCACACAACAAGTTGAAAAACGCAGGTTCTACTTTGGATTCAAGCTCCACCCTGTTCGATAATGCGTATTTCAAACTGCTATTGCAAGGGAAAAGCATATTTTCTTCGGATCAAGCTCTACTTTCTGCTCCATCCTCAAAGGCTTTGGTTTATGAGTTTGCTCGTAGCCAGCAAGATTTTGAAAATGCCTTTGTTCAGTCTATGATCAAGATGAGCAGCATCGTTTCAGCCAGTTCGGGACATGAAATTAGGCTCAATTGCAGGGTTGTCAACTAA 966 44.72 MRPTNMFALLLMIAICSLSSSLNALSSDYYEHTCPQVESIIATAVKKATSNDKTVPAALLRMHFHDCFIRGCDSSVLLDSKGKKKAEKDGPPNISLHAFYVIDNAKKELEASCPGVVSCADILALAARDAVVLSGGPNWEVPKGRKDGRISIADDTKKLPFPTFNFSQLQQSFAQRGLSVQDLVALSGGHTLGFAHCSSFQNRIHNFNTKTDVDPTLSSSFAASLRTTCPAHNKLKNAGSTLDSSSTLFDNAYFKLLLQGKSIFSSDQALLSAPSSKALVYEFARSQQDFENAFVQSMIKMSSIVSASSGHEIRLNCRVVN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9747372 9749374 - Conep17aG0146100.1 Cone17ag1423 456900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1423 321 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 FunFam Peroxidase 160 301 - -
Cone17ag1423 321 CDD secretory_peroxidase 28 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone17ag1423 321 Gene3D - 28 321 - -
Cone17ag1423 321 ProSiteProfiles Plant heme peroxidase family profile. 24 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PANTHER PEROXIDASE 25-RELATED 17 317 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cone17ag1423 321 FunFam Peroxidase 28 163 - -
Cone17ag1423 321 SUPERFAMILY Heme-dependent peroxidases 25 321 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone17ag1423 321 Gene3D Peroxidase, domain 2 160 301 - -
Cone17ag1423 321 Pfam Peroxidase 43 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1423 Cone-Chr17:9747372 Cone9ag1186 Cone-Chr9:8467753 7.56E-94 dispersed
Cone5ag0833 Cone-Chr5:3581103 Cone17ag1423 Cone-Chr17:9747372 1.04E-38 dispersed
Cone5ag0834 Cone-Chr5:3581568 Cone17ag1423 Cone-Chr17:9747372 3.97E-08 dispersed
Cone17ag1423 Cone-Chr17:9747372 Cone1ag1124 Cone-Chr1:55577059 1.25E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1423 K00430 - csv:101214403 485.337