Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1431 ATGGCGGATGATAAGTCGGATATGCTAATGTACCTTCATGGTGATCTGGATCTACGGATAATCGAGGCTAGGTGTTTGCCTAACATGGATTTACTCTCGGAGCGTCTCCGTCAATTCTTTGCCTCCTTCAATTCTTGCAGAGCGCCATTTTCAAAGAAGAAGCATCATCATTCACACGGAAAAATCATCACCAGCGATCCTTACGTAACCGTCTGCCTTTCTGGAGCGACGGTTGCTCGTACGCGCGTGATTTCAAACTCTCAGAATCCGACGTGGAATGAGCACTTCCTGATCCCCCTAGCCCACCAGGTATCCCAGGTCGAGTTTCATGTCAAAGACGACGATATGTTCGGCGCTGACATGATCGGAATCGCAACTGTCCCTGCTCGGAAAATCATATCCGGCGAAACAATCAACGATTGGTTTCCGATAATCAACTCCACCGGAGAGCCGCCCAAACCTGACGCAGCTGTTCATCTGGAAATGAAATTCACGCATTGCGATGACAACCCGCTTTACCGGAACGGGATCGAGGTGGACACGGACAACCTCGGAGTGCCAAACAGCTATTTCCCGGTCAGGCGAGGAGGGAACGTCACGCTTTATCAGGACGCTCACGTGCCTGATTCGATGCTGGAGAGGATCGAATTGGAAAATGGGAACTTGTTTCAGCACGAAAAGTGCTGGGAGGATATATGCCATGCCATTTTGGAGGCTCATCATTTGGTTTATATCGTGGGGTGGTCTATTTATCATAAGGTGAAGCTCGTCAGAGAGCCGACCAGACCATTGCCTAGCGGCGGGAATTTGAACTTGGGCGAGTTGCTCAAGTATAAATCTGAAGAAGGGGTTCGTGTTTTGTTGCTGGTCTGGGATGATAAGACTTCTCATAACAAATTCTTTCTCAAAACGAATGGAGTGATGCAAACTCATGATGAAGAAACTCGCAAGTTTTTTAAGCATTCCTCTGTCTCATGCGTGCTTTCACCTCGATATGCCAGTAGTAAGCTCAGCATTTTTAAGCAGCAGGTGGTTGGAACTCTTTTTACACATCACCAGAAGTGTGTGCTTGTCGATACACAAGCCCCTGGCAATAACAGAAAGATAACTGCTTTTATTGGAGGCCTCGACCTCTGCGATGGCCGTTATGATACTCCTGAGCATAGACTCTTCCGTGATCTTGACACTGTTTTTCAGGATGATTTTCATAATCCAACACTTCCTGGAGGATCTATGGGTCCTAGGCAACCCTGGCATGATTTGCATTGCAAAATCGAAGGGCCTGCTGCATATGATGTGCTAACTAATTTCGAACAGAGATGGAGAAAAGCCACAAAATGGTCTGAAATTGGACAACATTTCCGAAAGGTGACTCATTGGCATGAGGATGCGTTAATCAAGTTGGAAAGGATGTCATGGATACTTAGTCCAGCCTCTATATCAAATGATGATAGGGAGGATAAACCTGAAGATTGGCATGTTCAGGTGTTCCGATCCATTGATTCAGGGTCTTTAAAAGGATTTCCCAAAGATGTTAATCAAGCTGTGGCTCAGAATCTGGTATGCACAAAAAACTTGGTTGTAGACAAAAGCATTCAAACAGCATATATCCAAGCGATAAGATCGGCTCAACACTTCATATACATTGAAAACCAGTATTTTCTTGGATCATCATATGCATGGCCATCTTATAGGAATGCAGGTGCTGATAATCTGATTCCTATGGAGCTGGCTCTGAAGATTGCTAGTAAGATAAGAGCAAAGGAGAGATTTGCTGTATATATTGTAATACCAATGTGGCCGGAGGGTGCACCCTCTTCTGCCTCCGTTCAAGAAATTCTTTATTGGCAGGGTCAGACAATGCAAATGATGTACGACATCATAGGACGAGAGTTGAAGGTCATGAACCTAGACAACTCTCATCCTCTAGACTACCTTAACTTTTACTGTCTTGGCAATCGCGAGCAGCTTCCCAATCATCCTTCTTCAACTAATCATTCATCCAACGGAGACACGATTTCAACCCCACAAAAATTTCAACGGTTTATGATATATGTACATGCCAAAGGAATGATCGTGGATGATGAATACGTCATACTAGGATCTGCTAACATAAACCAACGTTCCATGGCGGGTTCAAGGGACACCGAGATAGCCATGGGTGCGTATCAACCTTGTCATACATGGACTAAGAAGAACCAACATCCACGTGGCCAGATTTATGGCTACAGAATGTCACTCTGGGCAGAACACATGGGGATGGTTGATAATTGCTTTAAGGAGCCTGAAATTTTGACCTGTGTGAATACAGTTAACAAAATAGCTGAAGAGAACTGGAAGAAATACACGACTGAGAATTTTACCCCTTTGCAGGGTCACCTACTCAAGTACCCACTTCACGTGGACGCTAACGGCAAGGTGTGCCCTCTTAAGGGACAGGAGACATTCCCGGATGTTGGGGGTAAGGTGAATCACTTCGATCTGGGAGAAGAGAAGGAAAATTGTGCGAGTGTGGAATTGGTGAAGGATCCATATACATAG 2541 45.22 MADDKSDMLMYLHGDLDLRIIEARCLPNMDLLSERLRQFFASFNSCRAPFSKKKHHHSHGKIITSDPYVTVCLSGATVARTRVISNSQNPTWNEHFLIPLAHQVSQVEFHVKDDDMFGADMIGIATVPARKIISGETINDWFPIINSTGEPPKPDAAVHLEMKFTHCDDNPLYRNGIEVDTDNLGVPNSYFPVRRGGNVTLYQDAHVPDSMLERIELENGNLFQHEKCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTRPLPSGGNLNLGELLKYKSEEGVRVLLLVWDDKTSHNKFFLKTNGVMQTHDEETRKFFKHSSVSCVLSPRYASSKLSIFKQQVVGTLFTHHQKCVLVDTQAPGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFQDDFHNPTLPGGSMGPRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWSEIGQHFRKVTHWHEDALIKLERMSWILSPASISNDDREDKPEDWHVQVFRSIDSGSLKGFPKDVNQAVAQNLVCTKNLVVDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYRNAGADNLIPMELALKIASKIRAKERFAVYIVIPMWPEGAPSSASVQEILYWQGQTMQMMYDIIGRELKVMNLDNSHPLDYLNFYCLGNREQLPNHPSSTNHSSNGDTISTPQKFQRFMIYVHAKGMIVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPCHTWTKKNQHPRGQIYGYRMSLWAEHMGMVDNCFKEPEILTCVNTVNKIAEENWKKYTTENFTPLQGHLLKYPLHVDANGKVCPLKGQETFPDVGGKVNHFDLGEEKENCASVELVKDPYT 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9772248 9776053 + Conep17aG0146900.1 Cone17ag1431 456908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1431 846 SMART C2_3c 15 141 IPR000008 -
Cone17ag1431 846 SUPERFAMILY Phospholipase D/nuclease 190 451 - -
Cone17ag1431 846 SMART pld_4 347 382 IPR001736 GO:0003824(InterPro)
Cone17ag1431 846 SMART pld_4 682 709 IPR001736 GO:0003824(InterPro)
Cone17ag1431 846 Pfam C2 domain 15 143 IPR000008 -
Cone17ag1431 846 Pfam Phospholipase D Active site motif 684 709 IPR001736 GO:0003824(InterPro)
Cone17ag1431 846 CDD C2_plant_PLD 8 165 - -
Cone17ag1431 846 PIRSF PLD_plant 1 833 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Cone17ag1431 846 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 347 382 IPR001736 GO:0003824(InterPro)
Cone17ag1431 846 Pfam Phospholipase D C terminal 756 823 IPR024632 -
Cone17ag1431 846 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 167 IPR035892 -
Cone17ag1431 846 Gene3D C2 domain 13 173 IPR035892 -
Cone17ag1431 846 FunFam Phospholipase D delta 219 463 - -
Cone17ag1431 846 ProSiteProfiles C2 domain profile. 1 142 IPR000008 -
Cone17ag1431 846 Gene3D Endonuclease Chain A 496 730 - -
Cone17ag1431 846 SUPERFAMILY Phospholipase D/nuclease 529 767 - -
Cone17ag1431 846 Gene3D Endonuclease Chain A 216 467 - -
Cone17ag1431 846 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 682 709 IPR001736 GO:0003824(InterPro)
Cone17ag1431 846 PANTHER PHOSPHOLIPASE D 11 823 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0317 Cone-Chr14:1494360 Cone17ag1431 Cone-Chr17:9772248 0 dispersed
Cone15ag0347 Cone-Chr15:1617072 Cone17ag1431 Cone-Chr17:9772248 7.63e-319 dispersed
Cone17ag1431 Cone-Chr17:9772248 Cone2ag0364 Cone-Chr2:1923354 1.29E-249 dispersed
Cone17ag1431 Cone-Chr17:9772248 Cone9ag1632 Cone-Chr9:11614724 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1431 K01115 - csv:101213442 1380.93