Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1451 ATGAAAGGAGCAGACGAGAACAACCTTGGCATGATCGGACCCGCAAACCTTCAGGGAGGGGGAATTCATGATGGAGGTGGCAAAGACGTGGGAGTAATTAGACAAAACCGTAGAGCATTGAGCGACATTAATAATCGCAATATCATTGGACTTCCTCCTAATTACCCTAATGAAATAAACAGAAGGGGCTTGTCTCATGGACATCTTGTTACGGACAAGGACGGAGCCATTCCGGTTCGTAGGCCAATTACCAGGAGGTTTGCTGCCCAACTAACAAAGATACAGCAGCAAATAGCACCAGAGAAAACCAACGAATCTGTGAAGTTGGTCCCAACTCCAAATGGGTCTGAAAATTCTGATGCTGTAGAGGTGAAAGAAAGCAATGCAACAAATAGTGAAACAGCAGTGCCTCCGGATGAGATCGAAATGGAAGATGCAGATGAACAACAGCCTGTTGTGGACATAGATAGCTCTGACAAGATGAATCCCCTTGCAGTTGTCGAGTATATTGAGGATTTATATGCCTACTACAGAAAAGCAGAGAGTTCGGCATGTGTCCCTGCTGACTATATGGCGCATCAATCTGACATTAATGAGAAGATGAGAAGTATTCTCATAGATTGGCTAATTGAGGTGCATTACAAGTTTGAACTAATGAGTGAGACCTTATTCCTGACCGTGAACTTGATCGACAGATTTTTGGCGGTTCAGCCCATTATTAGGAAGAAGCTCCAACTAGTTGGTGTGACTGCAATGCTGCTTGCTTGCAAATATGAAGAAGTTTCTGTTCCCATTGTTGAAGATTTCATTTTGATCACTGATAAGGCTTACAGCAGGAAGGAGGTACTTGATATGGAAAAATTGATGGTAAATATTTTACAGTTTAACATGTCAGTTCCCACAGCCTATGTGTTTATGAGGAGGTTTCTCAAAGCAGCTCAATCTAACAAAGAGCTCGAACAACTGTCCTTTTTCACTATTGAGCTTTGTCTGGTTGAGTACGAAATGCTCAAATTTCGACCATCTATGTTAGCTGCTGCAGCAATTTTCACAGCTCAGTGTGCTCTTGACGGGACTAAGCAATGGAGTAAGACAAGCGAGAGGCATACCAACTACTTGGGAGAAGAGCTTTTGGAATGCTCGAGGATGATGGTTACTTTTCATCAGAAAGCCGGAACTGGAAAGCTCACTGGAGTTTATCGGAAGTACTGCACATCGAAGTTAGGATATGCTGCAAGAAGTGAGCCTGCTAATTTTCTTCTGGGAGACTGA 1272 43.16 MKGADENNLGMIGPANLQGGGIHDGGGKDVGVIRQNRRALSDINNRNIIGLPPNYPNEINRRGLSHGHLVTDKDGAIPVRRPITRRFAAQLTKIQQQIAPEKTNESVKLVPTPNGSENSDAVEVKESNATNSETAVPPDEIEMEDADEQQPVVDIDSSDKMNPLAVVEYIEDLYAYYRKAESSACVPADYMAHQSDINEKMRSILIDWLIEVHYKFELMSETLFLTVNLIDRFLAVQPIIRKKLQLVGVTAMLLACKYEEVSVPIVEDFILITDKAYSRKEVLDMEKLMVNILQFNMSVPTAYVFMRRFLKAAQSNKELEQLSFFTIELCLVEYEMLKFRPSMLAAAAIFTAQCALDGTKQWSKTSERHTNYLGEELLECSRMMVTFHQKAGTGKLTGVYRKYCTSKLGYAARSEPANFLLGD 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9849759 9852283 - Conep17aG0149200.1 Cone17ag1451 456928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1451 423 CDD CYCLIN_AtCycB-like_rpt2 300 416 - -
Cone17ag1451 423 Gene3D - 172 410 - -
Cone17ag1451 423 ProSitePatterns Cyclins signature. 202 233 IPR048258 -
Cone17ag1451 423 PANTHER CYCLINS 147 404 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cone17ag1451 423 Pfam Cyclin, N-terminal domain 172 298 IPR006671 -
Cone17ag1451 423 MobiDBLite consensus disorder prediction 1 24 - -
Cone17ag1451 423 SUPERFAMILY Cyclin-like 162 297 IPR036915 -
Cone17ag1451 423 SUPERFAMILY Cyclin-like 299 418 IPR036915 -
Cone17ag1451 423 Pfam Cyclin, C-terminal domain 300 416 IPR004367 -
Cone17ag1451 423 CDD CYCLIN_AtCycB-like_rpt1 151 295 - -
Cone17ag1451 423 SMART cyclin_7 304 386 IPR013763 -
Cone17ag1451 423 SMART cyclin_7 207 291 IPR013763 -
Cone17ag1451 423 MobiDBLite consensus disorder prediction 103 134 - -
Cone17ag1451 423 FunFam G2/mitotic-specific cyclin-1 287 412 - -
Cone17ag1451 423 Gene3D - 186 298 - -
Cone17ag1451 423 SMART Cyclin_C_2 300 417 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1451 Cone-Chr17:9849759 Cone6ag1701 Cone-Chr6:12844184 1.94E-146 dispersed
Cone8ag1603 Cone-Chr8:11871861 Cone17ag1451 Cone-Chr17:9849759 7.76E-74 transposed
Cone12ag0859 Cone-Chr12:7710310 Cone17ag1451 Cone-Chr17:9849759 3.36E-124 wgd
Cone17ag1451 Cone-Chr17:9849759 Cone20ag0025 Cone-Chr20:155965 3.13E-228 wgd
Cone17ag1451 Cone-Chr17:9849759 Cone4ag2018 Cone-Chr4:14050059 1.02E-161 wgd
Cone17ag1451 Cone-Chr17:9849759 Cone7ag1934 Cone-Chr7:12340108 3.54E-181 wgd
Cone17ag1451 Cone-Chr17:9849759 Cone8ag0889 Cone-Chr8:8686330 5.19E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1451 K21777 - cit:102615702 525.783