Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag1471 | ATGACTCCTCCATTTAGGTTCCTCGGCCAGGTGAACTCCTCCTCTCCGCCGCCACCGGTTTCTTACGACTCAGACTTTGTCATAATTCTCGCAGCTCTTCTCTGCGCCTTAATTTGTGTTCTCGGCCTCCTAGCCGTCGCTCGCTGCGCCTGGATGCGCCACCTCTCCGGGTTGGGTCGAGGAGCTCCCAATGTCTCCGGATTAGGTCGAGGAGCTTCCACCGCCACCATTCGTATTCCAACTCCTCCCCTTCCACCAAACAAGGGCCTCAAGAAGAAGGTCCTTAGGTCTCTCCCTAAGCTCACTTTCTCACAGGAATCCTCAGCAGAGTTCTCAGACTGTGCGATCTGCCTCACAGAGTTCTCCTCCGGCGAAGAATTCCGAGTGTTGCCGCAGTGCGGGCATGGTTTCCACGTGGCCTGCATAGACACGTGGTTGAGGTCGTACTCCTCGTGCCCTTCGTGCCGTCAGATTCTGGTGGTGTCTCGCTGCCAGAAGTGCGGTAGCTTGCCGTCCAGCTCCAGTGGCGGTGGCGATATGGAAGGCAGGCGAAAGGAAAGAGAAGATGATGTGAATGGATTCCTGCCTTAG | 591 | 56.51 | MTPPFRFLGQVNSSSPPPPVSYDSDFVIILAALLCALICVLGLLAVARCAWMRHLSGLGRGAPNVSGLGRGASTATIRIPTPPLPPNKGLKKKVLRSLPKLTFSQESSAEFSDCAICLTEFSSGEEFRVLPQCGHGFHVACIDTWLRSYSSCPSCRQILVVSRCQKCGSLPSSSSGGGDMEGRRKEREDDVNGFLP | 196 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 9949472 | 9950380 | + | Conep17aG0151200.1 | Cone17ag1471 | 456948 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag1471 | 196 | CDD | RING-H2_EL5-like | 113 | 156 | - | - | |
Cone17ag1471 | 196 | MobiDBLite | consensus disorder prediction | 179 | 196 | - | - | |
Cone17ag1471 | 196 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 84 | 160 | IPR013083 | - | |
Cone17ag1471 | 196 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 16 | 176 | IPR052788 | - | |
Cone17ag1471 | 196 | MobiDBLite | consensus disorder prediction | 168 | 196 | - | - | |
Cone17ag1471 | 196 | SUPERFAMILY | RING/U-box | 94 | 162 | - | - | |
Cone17ag1471 | 196 | ProSiteProfiles | Zinc finger RING-type profile. | 114 | 156 | IPR001841 | - | |
Cone17ag1471 | 196 | SMART | ring_2 | 114 | 155 | IPR001841 | - | |
Cone17ag1471 | 196 | Pfam | Ring finger domain | 113 | 156 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag1471 | Cone-Chr17:9949472 | Cone5ag0140 | Cone-Chr5:606039 | 3.30E-24 | dispersed | |
Cone12ag0881 | Cone-Chr12:7847918 | Cone17ag1471 | Cone-Chr17:9949472 | 1.11E-56 | wgd | |
Cone17ag1471 | Cone-Chr17:9949472 | Cone20ag0007 | Cone-Chr20:67139 | 1.97E-107 | wgd | |
Cone17ag1471 | Cone-Chr17:9949472 | Cone4ag2034 | Cone-Chr4:14120697 | 2.56E-24 | wgd | |
Cone17ag1471 | Cone-Chr17:9949472 | Cone7ag1948 | Cone-Chr7:12422298 | 2.44E-65 | wgd | |
Cone17ag1471 | Cone-Chr17:9949472 | Cone8ag0912 | Cone-Chr8:8839713 | 1.62E-58 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag1471 | - | - | - | 0.0 |