Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1473 ATGGAGAAAGTGTTGGAGGTCCCGATGGATGAGATTCCTGAAGAGACCCCACCTCCTCCTCCTCCCCCGTCTTATATGTTTCTTTCATGGGAGTTCTTTCGCAAACACGGTCGTGACCTCTTTGCCTGTGCTGCCACTTGGTTTCTGCTGGACATAGTGTTCTATAGCAACAACCTCTTCCAATCTCAGATTTACAAGAAGGAACTTCCTAACCAGTGTAAGCTCAACGCTTATGAGGAAGCCTACAAAAATGCCAGATTTAATGCCATTGTGGCTAGCTGCTCCACCATCCCAGGCTATTGGTTCACCGTCTATTTCATCGACCTCGTCCGAAGAGTGAAAATTCAAATCATGGGATTTTGCTTCATGGGAATCGTGTACCTCGCTCTAGGGATACCTTATTATATGTATTGGGAGAATAACGCTAGAATAGGGTTTTTTGTCCTCTATTGCCTCACCTTCTTCTTCGCTAATTTCGGGCCCAACACAACTACCTTTATAGTTCCAGCAGAACTATTCCCTACTAGATTCTGA 534 45.13 MEKVLEVPMDEIPEETPPPPPPPSYMFLSWEFFRKHGRDLFACAATWFLLDIVFYSNNLFQSQIYKKELPNQCKLNAYEEAYKNARFNAIVASCSTIPGYWFTVYFIDLVRRVKIQIMGFCFMGIVYLALGIPYYMYWENNARIGFFVLYCLTFFFANFGPNTTTFIVPAELFPTRF 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9961530 9962063 - Conep17aG0151400.1 Cone17ag1473 456950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1473 177 Gene3D MFS general substrate transporter like domains 23 177 IPR036259 -
Cone17ag1473 177 MobiDBLite consensus disorder prediction 1 20 - -
Cone17ag1473 177 SUPERFAMILY MFS general substrate transporter 14 176 IPR036259 -
Cone17ag1473 177 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 30 176 - -
Cone17ag1473 177 Pfam Sugar (and other) transporter 96 177 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1473 Cone-Chr17:9961530 Cone17ag1475 Cone-Chr17:9967393 4.65E-114 dispersed
Cone17ag1473 Cone-Chr17:9961530 Cone17ag1474 Cone-Chr17:9963074 3.42E-114 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1473 K08176 - mdm:103428150 228.794