Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1474 ATGGAGAAAGTGTTGGAGGTCCCGATGGATGAGATTCCTGAACAGACCCCACCTCCTCCTCCTCCCCCGTCTTATCCATTTCTTTCATGGGAGTTCTTTCGCAGACACGGCCGTGACCTCTTTGCCTATGCCGCTACTTGGTTTCTGCTGGATATAGTGTTCTACAACAACAACCTCTTCCAATCTCAAATTTACAAGAAGGAACTTCCTATCCCGTGTAAGCTCAATGCTTATGAGGAAGCCTACAAAAATGCCAGATTTAATTCCATTGTGGCTAGCTGCTCTACCATCGCAGGCTATTGGTTCACCGTCTATTTCATCGACCCCGTCCGAAGAGTGAAAATTCAAATCATGGGATTTTGCTTCATGGGAATCATGTACTTGGCTCTAGGGATACCTTATTATATGTATTGGGAGAATAACGCCAGAATATGGTTCTTGGTCCTATATTGCCTCACATTCTTCTTCGCTAATTTCGGGCCCAACACAACTACCTTTATAGTTCCAGCAGAACTATTCCCTGCCAGATTCTGA 534 44.94 MEKVLEVPMDEIPEQTPPPPPPPSYPFLSWEFFRRHGRDLFAYAATWFLLDIVFYNNNLFQSQIYKKELPIPCKLNAYEEAYKNARFNSIVASCSTIAGYWFTVYFIDPVRRVKIQIMGFCFMGIMYLALGIPYYMYWENNARIWFLVLYCLTFFFANFGPNTTTFIVPAELFPARF 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9963074 9963607 - Conep17aG0151500.1 Cone17ag1474 456951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1474 177 SUPERFAMILY MFS general substrate transporter 12 176 IPR036259 -
Cone17ag1474 177 Gene3D MFS general substrate transporter like domains 24 177 IPR036259 -
Cone17ag1474 177 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 23 175 - -
Cone17ag1474 177 Pfam Sugar (and other) transporter 89 176 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1474 Cone-Chr17:9963074 Cone17ag1477 Cone-Chr17:9970144 4.75E-109 dispersed
Cone17ag1473 Cone-Chr17:9961530 Cone17ag1474 Cone-Chr17:9963074 3.42E-114 tandem
Cone17ag1474 Cone-Chr17:9963074 Cone17ag1475 Cone-Chr17:9967393 2.19E-119 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1474 K08176 - mdm:103428150 226.868