Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone17ag1477 ATGAGCCTAAAAGTCCTTTCGGCCCTGGACAGCGCCAAAATCCAGTTCTACCATTTCAAGGCCATCATAGTGGCTGGGATGGGCCTCTTCACAGACGCCTACGATCTCTTCGCCATCACTCCCGTCATGATCCTCATCGGACGTGTCTACTACAAGGACCAGTCTCCTAGTCAACAACAATATCAGGTCCCCCCGGCAGTGAAGTCATCCATGCTGGCTGTAGCTTTACTGGGGACCGCTATTGGTCAAGTCGTGTTTGGAATACTGGGTGACAGAGTCGGACGGCGGCGCGTGTACGGGGCGGCCTTGATGCTCATGGTGGTCAGCTCGATAGGGTGCGGGTTCTCAGTGTGCACCACGCGCGGGTGTGTTCTGGCCAGCCTGGGCTTCTTCAGGTTCCTACTGGGTCTGGGGATCGGGGGAGACTACCCGCTGTCGGCAACGATCATGTCGGAGTTTGCAAACAAGAGTACACGTGGGGCGTTCATAGCGGCGGTGTTCTCGATGCAGGGACTGGGGATTCTGGCGAGCTCGATGGTGACGATGGCGGTGTGCTCGATATTCAACATGCATCATCATTCACCCAGAGATCCCACGCCGAAGGAGGTTGACATTGCGTGGAGGTTGATCCTCATTCTCGGCGCTGTCCCCGCCGCTACCACTTTTTATTGGCGTATGCTGATGCCTGAAACTGCCAGGTATACAGCTCTGGTGGGATTAGATGTGGAACAAGCGACGAAGGACATGGAGAAAATGTTGGAGGTCCCGATGCATGAGATTCGTGAAGAGACCCCACTTCCTCCTCCTCCCTCGTCTTATCCATTTCTTTCATGGGAGTTCTTTCACAGACACGGCCGTGACCTCTTTGCATGTGCCACCACTTGGTTTCTGCTGGATATAGTGTTCTACAGCAACAACCTCTTCCAATCTCAAATTTACAAGAAGGAACTTCCTATCCCGTGTAAGCTCAATGCTTATGAGGAAGCCTACAAAAATGCCAGATTTAATGCCATTGTGGCTAGCTGCTCCACCATCCCAGGCTATTGGTTCACCGTCTATTTCATTGACCGCGTCGGAAGAGTGAAAATTCAAATCATGGGATTTTGCTTCATGGGAATCGTGTACCTGGCTCTAGGGATACCTTATTATATGTATTGGGAGAATAATGCCAACATAGGGTTCTTGGTCCTCTATTGCCTCACCTTCTTCTTCGCTAATTTCGGGCCCAACACAACTACCTTTATAGTTCCAGCAGAACTATTCCCTGCCAGATTCCGATCGACATGTCATGGAATATCTGGGGCGGTAGGAAAGGTGGGTGCAATAATTGGTTCGGTCGGGTTTTTGTGGGCATCACACATCAAGAAAGAGGCCGGGTATCCGAAAGCAATTGGAATGACGGCGTTGCTGATAATATTGGGAGGGGTTAGTATAGTGGGGATGGTCATCACTTATTTGTTCACAAGGGAAACAATGGGGAGGTCTTTAGAAGAGAATGAGAATGAAGATATTAATGGGGGTTGTATAGTCAGATGTGCATGTTTCGGGGCGTACGACAATGTCAATACCAGCGGTAACGTGAACCCCCATCCATCTTCACATGAACGTCACGCGACCATCTCCGTCTCTAATTCAATCGATCAAGGCCTCTCACACCGCCCATCAGCTTCTTGA 1674 50.66 MSLKVLSALDSAKIQFYHFKAIIVAGMGLFTDAYDLFAITPVMILIGRVYYKDQSPSQQQYQVPPAVKSSMLAVALLGTAIGQVVFGILGDRVGRRRVYGAALMLMVVSSIGCGFSVCTTRGCVLASLGFFRFLLGLGIGGDYPLSATIMSEFANKSTRGAFIAAVFSMQGLGILASSMVTMAVCSIFNMHHHSPRDPTPKEVDIAWRLILILGAVPAATTFYWRMLMPETARYTALVGLDVEQATKDMEKMLEVPMHEIREETPLPPPPSSYPFLSWEFFHRHGRDLFACATTWFLLDIVFYSNNLFQSQIYKKELPIPCKLNAYEEAYKNARFNAIVASCSTIPGYWFTVYFIDRVGRVKIQIMGFCFMGIVYLALGIPYYMYWENNANIGFLVLYCLTFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAVGKVGAIIGSVGFLWASHIKKEAGYPKAIGMTALLIILGGVSIVGMVITYLFTRETMGRSLEENENEDINGGCIVRCACFGAYDNVNTSGNVNPHPSSHERHATISVSNSIDQGLSHRPSAS 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 9970144 9974040 - Conep17aG0151800.1 Cone17ag1477 456954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone17ag1477 557 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone17ag1477 557 FunFam Inorganic phosphate transporter 1-6 17 506 - -
Cone17ag1477 557 MobiDBLite consensus disorder prediction 526 557 - -
Cone17ag1477 557 Pfam Sugar (and other) transporter 22 500 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone17ag1477 557 CDD MFS_PhT 22 491 - -
Cone17ag1477 557 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 492 IPR020846 GO:0022857(InterPro)
Cone17ag1477 557 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 499 - -
Cone17ag1477 557 SUPERFAMILY MFS general substrate transporter 9 501 IPR036259 -
Cone17ag1477 557 Gene3D MFS general substrate transporter like domains 17 509 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1474 Cone-Chr17:9963074 Cone17ag1477 Cone-Chr17:9970144 4.75E-109 dispersed
Cone17ag1475 Cone-Chr17:9967393 Cone17ag1477 Cone-Chr17:9970144 1.38E-181 dispersed
Cone17ag1477 Cone-Chr17:9970144 Cone4ag0326 Cone-Chr4:1480205 3.90E-173 dispersed
Cone17ag1476 Cone-Chr17:9968841 Cone17ag1477 Cone-Chr17:9970144 4.30E-176 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone17ag1477 K08176 - vvi:100251317 699.123