Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone17ag1478 | ATGTCTGGTTCTGAGACAGGAATTTTGACGAGTAGCGAACCCTACAGCGTGGGTCTTCAGTCAGCGCCGGTCCTACAGAACATGCGCTTGTTTTTCAGTGCAGATGGGACGGCTGTGTATAGGCCTATCACTCCTTCTTCATCGTCCCTTTACCCCTCCGATGCTGGAGTCGCCAGTGAGGTCTCCAGCGACGGGGGTTGTTTAGTGTCCCAGGGGAATATGGGTAGTGAGCCATTGAAGAGGAAGAGAGGAAGACCCAGGAAGTATGGGCCCGATGGCACCATGGCTATGGGTCTGAGTCCTCCTAAGGAAAGCGGTGGGTTTTCTCCTTCAAATTCTCAGGCTGCCGTATCAGGAGGACCAGCGTCACCGACTTCTTTGAAGAAAGCGAGAGGCAGACCACCTGGTTCTGGCAATAAAAAACAACAAAAGGAAGCCTTGGGATCCGCTGGCGTTGGGTTCACTCCACATATCGTTACTGTCAAAGCGGGAGAGGATGTATCCTCAAAAATATTGTCATTGTCACAGAGTGGTAGTAGAGCTGTTTGTGTTTTGTCAGCAAATGGAGCAATCTCTAGCGTGACTCTACAGCAACCTGCCACATCTTGCGGAACTGTGACTTATGAGGGGAGATATGAGATACTGTCACTATGTGGTACATTTCTTGTATCTGAGAATGAGGGCCAGAGGAGCAGAAGTGGGGGTTTGAGCGTGTCCCTGGCTGGCCCAGACGGCCGTATATTAGGTGGTGGGGTGGCTGGTCTTTTAATGGCTGCGTCTCCTGTTCAGGTGGTGGTTGGGAGTTTCATTGCCGGGGCCACACCAAACTGA | 831 | 51.74 | MSGSETGILTSSEPYSVGLQSAPVLQNMRLFFSADGTAVYRPITPSSSSLYPSDAGVASEVSSDGGCLVSQGNMGSEPLKRKRGRPRKYGPDGTMAMGLSPPKESGGFSPSNSQAAVSGGPASPTSLKKARGRPPGSGNKKQQKEALGSAGVGFTPHIVTVKAGEDVSSKILSLSQSGSRAVCVLSANGAISSVTLQQPATSCGTVTYEGRYEILSLCGTFLVSENEGQRSRSGGLSVSLAGPDGRILGGGVAGLLMAASPVQVVVGSFIAGATPN | 276 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 9974559 | 9977472 | - | Conep17aG0151900.1 | Cone17ag1478 | 456955 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone17ag1478 | 276 | ProSiteProfiles | PPC domain profile profile. | 150 | 276 | IPR005175 | - | |
Cone17ag1478 | 276 | MobiDBLite | consensus disorder prediction | 42 | 149 | - | - | |
Cone17ag1478 | 276 | CDD | DUF296 | 155 | 269 | IPR005175 | - | |
Cone17ag1478 | 276 | MobiDBLite | consensus disorder prediction | 42 | 56 | - | - | |
Cone17ag1478 | 276 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 154 | 270 | - | - | |
Cone17ag1478 | 276 | Gene3D | - | 156 | 274 | - | - | |
Cone17ag1478 | 276 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 156 | 270 | IPR005175 | - | |
Cone17ag1478 | 276 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 58 | 272 | IPR039605 | GO:0003680(InterPro) | |
Cone17ag1478 | 276 | SMART | AT_hook_2 | 80 | 92 | IPR017956 | GO:0003677(InterPro) | |
Cone17ag1478 | 276 | SMART | AT_hook_2 | 128 | 140 | IPR017956 | GO:0003677(InterPro) | |
Cone17ag1478 | 276 | MobiDBLite | consensus disorder prediction | 105 | 121 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0417 | Cone-Chr11:2068492 | Cone17ag1478 | Cone-Chr17:9974559 | 1.27E-67 | dispersed | |
Cone17ag1478 | Cone-Chr17:9974559 | Cone8ag0467 | Cone-Chr8:3054867 | 3.29E-69 | dispersed | |
Cone17ag1478 | Cone-Chr17:9974559 | Cone18ag1088 | Cone-Chr18:7983114 | 9.48E-71 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone17ag1478 | - | - | - | 0.0 |