Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag0006 | ATGAAGCTAAATGCCACTCTTTTTTCTGCATTTATCTCCTCATCGGTGTTATTCTGCTTGGTCTTTGCTATTGCTCCTCCTACTGTTAGATCAGCACCTTCCTCTCCCAAACATCTTTTTCGTGGAATTGCCCCAGGAGATGAGGACTATTACAAATCGTCGGACGTGATTCAATGCAAGGACGGATCGAAGAAATTCACGAAAGACCAGCTCAACGATGACTTTTGCGATTGCCCTGATGGCACTGACGAGCCTGGTACATCCGCATGCCCACATGGAAAATTCTACTGTCAAAATGCCGGGCATGTTCCCCTTATCTTGTTTTCTTCCATGGTGAATGATGGCATTTGTGATTGCTGTGATGGAAGTGATGAGTATAACCATCAAGTAAAGTGTGCAAATACATGCTGGGAGGCTGGGAAAGTAGCAAGAGATAAACTGAACAAAAAGATTGCCACATATCAAGAAGGTTCTAAAGTACGGAAACAGGAAGTTGAATACGCAAAGGAAGCTATAGCCAAGGATGAGGCAGAACTACTAAAGTTGAAAAATGAGGAGAAAATACTAAAAGGACTTGTTCAACAGCTTAAAGAACGCAAGGAACAAATAGAAAGGGCTGAAGAGAAGGAGCGTCTACGAAAAGAGAAGGAAGAGAAGGAAAAGAAAGAAGCTGAGGAGAAAGCTAGTATTGGAAAAGGCAAAGCTGAGGAGGACCCTAAGCAAGAGAAAGATGAAAGTGTGAATCATATTGATGGTGAAGACAAGCCCACAAAAGGTGATGTTGATGATAAAAGTAGGCATGGGGCAGGATCTCCTTCAGATCAGGATGTGATAGAGGACCATGTAGATGTTGCAGCAGAAGTTCAACACATTAATACACCTGAAAATCAAGAATCATCTCTTAATGTAGAAGAACAGGGAAAAATTTTACCTGAGACTACAGAAGAATTAACGAGGGAAGAGTTGGGCCGTCTTGTTGCTTCTCGGTGGACAGGGAAAGATACTGGTAAGGAAACAGAGGAAGTGGATTCTTCAAAAGCTGATTATAACAGCCTTAATGGGATCCCAAAGGATTCGGATGATGAGGAAGATGATGGCTATGCATCTGAGACTGATGATGACAGCCAGAAACATGAGGAGGATCTAGAGGATGAAACAGATAGAGATCACAGGGAGGAGGATCTTGATGATTCTAGTTCTTCGTACAGATACGATTCAGACGTTGAATCAGATTTTTCAGATGTGGACATCTCAACTAACCCCTCCTGGTTGGAGAAGATACAACAAACTATGCGAAATGTTCTACAAGCTGTTAACATCTTCCAGGCTCCAGTGAACCAATCAGATGCTGCTTTTGTGCGCAAGGAGTATGATGAATCCAGTGCCAAGCTATCTAAAATACAGGCACGAATATCAAGTTTGACACAAAAGCAAAAGCATGATTTTGGTCCAGAGAAATCATTCTATTCATTCTATGGCCGTTGCTTTGAGAGCAAGCAGAACAAGTATGTTTACAAAGTCTGCCCATATAAACAAGCTTCACAGATTGAGGGCCACTCAACCACCCGTTTGGGGCAGTGGGACAAATTTGAGGACTCATACAGATTCATGATATTTTCAAATGGTGATAGATGCTGGAATGGACCTGATAGAAGTTTGAAGGTCAGGTTAAGATGTGGGCTGAAAAATGAAATTACTGATGTGGATGAACCAAGCCGATGCGAATACGTGGCATTGTTATCTACCCCAGCTGTCTGCCTTGAGGAAATACTTCAGGAGCTGCAACAGAAACTAGACTCGATGAACCAAGAACCACAAAAGCACGATGAGCTTTAG | 1836 | 42.43 | MKLNATLFSAFISSSVLFCLVFAIAPPTVRSAPSSPKHLFRGIAPGDEDYYKSSDVIQCKDGSKKFTKDQLNDDFCDCPDGTDEPGTSACPHGKFYCQNAGHVPLILFSSMVNDGICDCCDGSDEYNHQVKCANTCWEAGKVARDKLNKKIATYQEGSKVRKQEVEYAKEAIAKDEAELLKLKNEEKILKGLVQQLKERKEQIERAEEKERLRKEKEEKEKKEAEEKASIGKGKAEEDPKQEKDESVNHIDGEDKPTKGDVDDKSRHGAGSPSDQDVIEDHVDVAAEVQHINTPENQESSLNVEEQGKILPETTEELTREELGRLVASRWTGKDTGKETEEVDSSKADYNSLNGIPKDSDDEEDDGYASETDDDSQKHEEDLEDETDRDHREEDLDDSSSSYRYDSDVESDFSDVDISTNPSWLEKIQQTMRNVLQAVNIFQAPVNQSDAAFVRKEYDESSAKLSKIQARISSLTQKQKHDFGPEKSFYSFYGRCFESKQNKYVYKVCPYKQASQIEGHSTTRLGQWDKFEDSYRFMIFSNGDRCWNGPDRSLKVRLRCGLKNEITDVDEPSRCEYVALLSTPAVCLEEILQELQQKLDSMNQEPQKHDEL | 611 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 41376 | 47527 | + | Conep18aG0000600.1 | Cone18ag0006 | 456967 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag0006 | 611 | ProSiteProfiles | MRH domain profile. | 493 | 588 | IPR044865 | - | |
Cone18ag0006 | 611 | SUPERFAMILY | LDL receptor-like module | 88 | 128 | IPR036055 | GO:0005515(InterPro) | |
Cone18ag0006 | 611 | MobiDBLite | consensus disorder prediction | 392 | 410 | - | - | |
Cone18ag0006 | 611 | MobiDBLite | consensus disorder prediction | 290 | 307 | - | - | |
Cone18ag0006 | 611 | MobiDBLite | consensus disorder prediction | 309 | 345 | - | - | |
Cone18ag0006 | 611 | MobiDBLite | consensus disorder prediction | 204 | 412 | - | - | |
Cone18ag0006 | 611 | Pfam | Glucosidase II beta subunit-like protein | 454 | 601 | IPR036607 | - | |
Cone18ag0006 | 611 | Coils | Coil | 457 | 477 | - | - | |
Cone18ag0006 | 611 | MobiDBLite | consensus disorder prediction | 204 | 286 | - | - | |
Cone18ag0006 | 611 | Coils | Coil | 584 | 604 | - | - | |
Cone18ag0006 | 611 | Coils | Coil | 165 | 234 | - | - | |
Cone18ag0006 | 611 | PANTHER | N-LINKED OLIGOSACCHARIDE PROCESSING | 20 | 596 | IPR039794 | GO:0006491(PANTHER)|GO:0017177(PANTHER) | |
Cone18ag0006 | 611 | MobiDBLite | consensus disorder prediction | 371 | 385 | - | - | |
Cone18ag0006 | 611 | Pfam | Glucosidase II beta subunit-like | 35 | 173 | IPR028146 | - | |
Cone18ag0006 | 611 | Gene3D | - | 488 | 586 | IPR009011 | - | |
Cone18ag0006 | 611 | Gene3D | - | 86 | 137 | IPR036055 | GO:0005515(InterPro) | |
Cone18ag0006 | 611 | SUPERFAMILY | Mannose 6-phosphate receptor domain | 496 | 586 | IPR009011 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag1585 | Cone-Chr11:10995446 | Cone18ag0006 | Cone-Chr18:41376 | 0 | dispersed | |
Cone18ag0006 | Cone-Chr18:41376 | Cone8ag1415 | Cone-Chr8:11071169 | 9.70E-20 | dispersed | |
Cone18ag0006 | Cone-Chr18:41376 | Cone12ag1359 | Cone-Chr12:10120371 | 4.31E-30 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag0006 | K08288 | - | mdm:103414660 | 709.909 |