Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0085 ATGGAGTACGTTGTGTCAGTTTTCCCGAGCTTAACTTTCCATCTTCACACGACAAGATCTTGGGATTTCATGGGTTTACATATTAACACAACGAATCGGAATCTTACTTCCGAAAGTGATGTCATCATTGGAGTCATCGACATGGGAATCTGGCCAGAATCTGAGAGTTTCACCGACGAAAATTTCAGCCCTCCTCCGGCAAAATGGAAAGGCGGTTGTTTTGGCGGGAAAAATTTCACTTGCAATAATAAGATCATCGGTGCTAGATATTGCAACCTGACATTAACTCCTGAAAATGAATCCGCTCGAGACGAAATAGGCCATGGAACACATGTTTCATCTATAGCAGCTGGAAACAACGTACAAGATGCGAGCTTTTACGGATTGGCGAAAGGAACAGCACGAGGCGGAGTTCCTTCAGCAAGAATTGTTGCGTATAAAGTTTGTTCTCTGGGAGGGTGCCAAGCAGCTGATATCTTAGCCGGTTTTGACGACGCTATTGCAGATGGGGTCGATATTATAACCATTTCTCTTGGCGCTTTTCATGCAATGGAGAAAGGGATACTTACGGTTACTTCGGCCGGAAATGGGGGTCCCGTCGAGGGTTCGGTTTTAAGCTCCGTGATATGGATACTTACTGTTGGAGCAAGCAGTACGGACAGGAAGTTCATCGACAAAGTTGTTCTTGGGAACGGAAAGACATTGGTTGGAAATTCCATAAATTATTTCACTTCACAAGGGCAAAAACTGCCTCTAATCCACGGACTAAATGCCTCGACTATGTGTAGTGAAGACGAAGCTCGAAGTTGTGCAGAAGACTGTCTCAATACCAGTTTGGTTAAGGGTAAGATCGTTGTATGCGAATCTTTTGGTGGGGCGTTTGAGGCTTTCCGGGCGAATGCATCGGGGGCAATCACAGGAAATTACAAGCTTTTTGATACATCTTTTGTTTTCCCATTACCAGCATGTGAATTAGATCCGAACAACTACTTCTCTATTGTGAATTACATGCATTATTCGTCGAACATGTCTCAAGCTGAGATTCTACGAAGCGAAACTGTTGACGGCACGAATGCTCGAATGGTTACCGGATTCTCGTCACGTGGGCCCCAACAGAGGTATTCCAGACATTTTGAAGCCCGATATAACTGCTCCGGGAGTGGAAATCTTGGCCGCATATTCACCCATCGCTTCTCCTTCATTTATCCCGGATGA 1215 45.02 MEYVVSVFPSLTFHLHTTRSWDFMGLHINTTNRNLTSESDVIIGVIDMGIWPESESFTDENFSPPPAKWKGGCFGGKNFTCNNKIIGARYCNLTLTPENESARDEIGHGTHVSSIAAGNNVQDASFYGLAKGTARGGVPSARIVAYKVCSLGGCQAADILAGFDDAIADGVDIITISLGAFHAMEKGILTVTSAGNGGPVEGSVLSSVIWILTVGASSTDRKFIDKVVLGNGKTLVGNSINYFTSQGQKLPLIHGLNASTMCSEDEARSCAEDCLNTSLVKGKIVVCESFGGAFEAFRANASGAITGNYKLFDTSFVFPLPACELDPNNYFSIVNYMHYSSNMSQAEILRSETVDGTNARMVTGFSSRGPQQRYSRHFEARYNCSGSGNLGRIFTHRFSFIYPG 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 452216 453430 - Conep18aG0008600.1 Cone18ag0085 457046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0085 404 Gene3D - 220 355 - -
Cone18ag0085 404 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 372 IPR045051 -
Cone18ag0085 404 ProSiteProfiles Serine proteases, subtilase domain profile. 20 404 - -
Cone18ag0085 404 Pfam Subtilase family 39 372 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone18ag0085 404 CDD PA_subtilisin_like 227 337 - -
Cone18ag0085 404 Gene3D Peptidase S8/S53 domain 40 375 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone18ag0085 404 SUPERFAMILY Subtilisin-like 15 240 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone18ag0085 404 ProSitePatterns Serine proteases, subtilase family, histidine active site. 108 118 IPR022398 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0085 Cone-Chr18:452216 Cone5ag0831 Cone-Chr5:3572195 1.29E-96 dispersed
Cone18ag0085 Cone-Chr18:452216 Cone7ag0423 Cone-Chr7:1878325 1.05E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0085 - - - 0.0