Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag0111 | ATGGATCCACTATCTTCTCCGGAGCTGGACCTGAACAATCTCAGAGCTCTGAAAATCCTCGGCAAAGGAGCTATGGGAACAGTCTTCCTCGTCCACGACCGGGCGGCTGACCCCTCTGCCCGCTCCCCCTTCGCCATTAAAGTCATCGACAAGGACTCCTTCCATACTAGACTCGACGCTGAACGTCGAGCTCGCTGGGAAATTCAGGTCCTGGCCCGACTTTCCGTTCCAAAACCGCATCCATTCCTCCCCTCCCTTCTGGGTACGTTCGAATCCGATGACCTCTTAGGCTGGGCCGTTCCTTACTGTCCTGGCGGCGATCTCAACGTTCTCCGTTACCGCCAGACCGACCGCGTTTACTCCCCGGCGGTCATTAGGTTCTATCTAGCTCAGCTCGTCTGCGCTCTCGACCACCTTCATACCATGGGCATCGCTTACCGCGACTTAAAGCCTGAAAACGTTTTGATTCAACAATCCGGTCACGTGACACTCACTGACTTCGACCTTTCCCGTAATTTAACCCCTAAATCCGCCACGGTCGCTATATCCGACGAAGAAACCCCGCCGCCGGAGATTCCTCGAGGACACAAGCGAAACCTGACTCGGTGGATATCAACCGTCGGTTCAGAGAAGAACAACAAAAAGAGCTTGAAGAAGGCGAATTCGGCACGAGTCAGCCCGGTGAGTCGCCGGAAAACGAGTTTCTCCAACGGCGAACGGTCCTTCTCATTCGTCGGAACAGAGGAGTACGTCTCGCCGGAAGTCGTGCGCGGCGACGGGCACGAATTCGCCGTCGATTGGTGGGCCATGGGAGTTTTAACGTACGAGATGCTGTATGGAACGACGCCGTTCAAAGGTAAAAATCGGAAGGAAACGTTTCGAAACGTTTTGTTAAAGGCGCCAGAGTTCGTTGGGCAACGCACCTCTTTAACGGATTTGATCGGACGGTTACTAGAAAAGGACCCCACAAGAAGATTAGGATATCTTAGAGGCGCGAACGAGATCAAGGAACACGATTTCTTCAGGGGTGTAAAGTGGGACCGACTAACGGAAGTCTTACGCCCACCCTTTATTCCGTCAATGGAAGAGGAGGATTCGACGGAGAAATTGACCTCCGGTGGGATTGACATTGAAGTTTACTTCCAGCGCTTGAGATCACCGCCGTCAATTCCTCCTTCTCCGACAGCCGAAGGAGAGAGGAACGTGTGGGTGACAGAATTCTGA | 1224 | 53.43 | MDPLSSPELDLNNLRALKILGKGAMGTVFLVHDRAADPSARSPFAIKVIDKDSFHTRLDAERRARWEIQVLARLSVPKPHPFLPSLLGTFESDDLLGWAVPYCPGGDLNVLRYRQTDRVYSPAVIRFYLAQLVCALDHLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRNLTPKSATVAISDEETPPPEIPRGHKRNLTRWISTVGSEKNNKKSLKKANSARVSPVSRRKTSFSNGERSFSFVGTEEYVSPEVVRGDGHEFAVDWWAMGVLTYEMLYGTTPFKGKNRKETFRNVLLKAPEFVGQRTSLTDLIGRLLEKDPTRRLGYLRGANEIKEHDFFRGVKWDRLTEVLRPPFIPSMEEEDSTEKLTSGGIDIEVYFQRLRSPPSIPPSPTAEGERNVWVTEF | 407 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 581489 | 582712 | + | Conep18aG0011200.1 | Cone18ag0111 | 457072 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag0111 | 407 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 342 | 407 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone18ag0111 | 407 | MobiDBLite | consensus disorder prediction | 209 | 235 | - | - | |
Cone18ag0111 | 407 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 144 | 156 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone18ag0111 | 407 | MobiDBLite | consensus disorder prediction | 219 | 235 | - | - | |
Cone18ag0111 | 407 | SUPERFAMILY | Protein kinase-like (PK-like) | 11 | 391 | IPR011009 | - | |
Cone18ag0111 | 407 | Pfam | Protein kinase domain | 236 | 341 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone18ag0111 | 407 | Pfam | Protein kinase domain | 17 | 192 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone18ag0111 | 407 | Gene3D | Phosphorylase Kinase; domain 1 | 361 | 370 | - | - | |
Cone18ag0111 | 407 | Gene3D | Transferase(Phosphotransferase) domain 1 | 107 | 192 | - | - | |
Cone18ag0111 | 407 | SMART | serkin_6 | 14 | 341 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone18ag0111 | 407 | FunFam | Serine/threonine-protein kinase UCNL | 14 | 106 | - | - | |
Cone18ag0111 | 407 | FunFam | Serine/threonine-protein kinase OXI1 | 239 | 360 | - | - | |
Cone18ag0111 | 407 | Gene3D | Phosphorylase Kinase; domain 1 | 14 | 106 | - | - | |
Cone18ag0111 | 407 | Gene3D | Transferase(Phosphotransferase) domain 1 | 236 | 360 | - | - | |
Cone18ag0111 | 407 | ProSitePatterns | Protein kinases ATP-binding region signature. | 20 | 47 | IPR017441 | GO:0005524(InterPro) | |
Cone18ag0111 | 407 | PANTHER | FLIPPASE KINASE 1-RELATED | 8 | 365 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cone18ag0111 | 407 | ProSiteProfiles | Protein kinase domain profile. | 14 | 341 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone18ag0111 | 407 | FunFam | Serine/threonine-protein kinase OXI1 | 107 | 175 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag0111 | Cone-Chr18:581489 | Cone3ag0616 | Cone-Chr3:3050306 | 1.03E-96 | dispersed | |
Cone11ag1483 | Cone-Chr11:10511741 | Cone18ag0111 | Cone-Chr18:581489 | 2.24E-281 | wgd | |
Cone14ag0992 | Cone-Chr14:8212095 | Cone18ag0111 | Cone-Chr18:581489 | 5.54E-68 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82301 | PF13519 | VWA_2 | 7.10E-13 | CL0128 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag0111 | - | - | - | 0.0 |