Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0117 ATGGTGAGACTTATGATGGGTGATTACACATTGGGCGATAGTTCCGATATAGAAGTTGACGATTTAAGGATTGAAAACATTGCGGAAAAAGACGTTAGTGATGAAGAAATCGAACCAGAGGAATTGGAAAGGAGGATGTGGAAGGACCGGATCAAGCTTAAAAGGATCAAGGAAAAACAAAAGCTCGAGGCTCAACAGGCAGCCGAGAAGCAACAGAAACCGAAACAGACTTCAGATCAGGCCCAAAGGAAGAAAATGTCTAGAGCCCAAGATGGGATTCTCAAGTACATGTTGAAGTTGATGGAAGTTTGCAAAGCACGTGGGTTCGTTTATGGTATCATCCCGGAAAAGGGAAAGCCCGTTAGCGGGTCGTCCGATAACATCCGGGCTTGGTGGAAAGAAAAGGTAAAGTTTGACAAGAATGGGCCCGCCGCTATAACTAAATATGAAGCGGAGTGTCTTGCAATGGGAGAGGCGGAGAATAACCGGAACAGGAATTCTCAAAGCATTCTTCAAGACCTTCAAGATGCTACTCTTGGGTCTCTTTTGTCTTCTTTAATGCAACATTGCGACCCACCTCAAAGGAAATTTCCATTAGAGAAGGGGGTCCCACCGCCTTGGTGGCCGACTGGGAATGAAGATTGGTGGGTCAAACTCGGGCTGCCCCACGGACAGGTCCCTCCATATAAGAAGCCACATGATTTGAAGAAGATGTGGAAAGTTGAAGTCTTAACGGCTGTGATTAAGCATATGTCGCCTGATATTGCTAAGATAAGAAGACATGTTAGACAATCAAAGTGCTTGCAAGATAAGATGACGGCAAAAGAGAGTGCGATTTGGTTAGGGGTTTTAAGCCGAGAAGAATCTTCGATGAGACAACCTAGCTGTGATAATGATACATCTGGAGTAACTGAGATGCCTCCATGTGGCGGGAGTGAGAAACAAGCGGCAGTTAGTAGTGGTAGCGACTATGATGTTGATGGTGCTGAAGATGGGCTTGGCTCCGTTTCATCTAAAGATGATAGGAGAAGTCAATCCGTGGATGCGGAATTGCCCATGCAAGAAAAAGTACATATTGAAAAACAACCTAGGAGAAAAAGACCTCGTACCAAGTCACACCAAAACCGGGTTGGTGAAGTTGGTCAATTTCCAGCCCCGTCTCCTCTAAACCCCTTGCCGGATATTAACCAATTGGATGCTCAATTAGTTGAACATAATGAGATGATTAATGGGTCGATACCTCCTACGGAGGAGGATATTGCGATTCAGACACATTTAGCGGGAACAACAGATTTCAATCATTTATTGGGACTAGGTTCGGAGGATGTGATTTCTACTCAGAGCATGTTTGTTGATGGAAGGCCATTACTGGGTCCCCCAATTCAAAATACAGAGATGCATCATGGGGGTTCTTACAATGCTTATCATCATTATAATCCATTGGTGGATTACCAGTCTCAGATAGGTATGGAAAGACAGCAAACTCAGATCCAGTCTCAGATTGGTATGGAAGGACAGCAACCTCAGATAAGAGCTGAAAATGGCGGACCGCCTGGAAATGAGGTGGTGGTTAATGGAGGAGGAGATTTGAATTATTTTGGAAATCATAGTGAACCGGATAGACCGGTAGATACCCAATTTGGGTCTCCAATCAATAGCTTGTCAATATTTGGAGGGTTTAGTGATAGCCCCTTCAATCTTGGAATTGATGGCATGGGTCTGTTTGATGACCTTCTGCCTGATGATCTTAAGACTGACGATTTTGTGCTTGATGAAGAAGATATGATCCAGTGTTTCGGATCATAG 1806 44.35 MVRLMMGDYTLGDSSDIEVDDLRIENIAEKDVSDEEIEPEELERRMWKDRIKLKRIKEKQKLEAQQAAEKQQKPKQTSDQAQRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAITKYEAECLAMGEAENNRNRNSQSILQDLQDATLGSLLSSLMQHCDPPQRKFPLEKGVPPPWWPTGNEDWWVKLGLPHGQVPPYKKPHDLKKMWKVEVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESSMRQPSCDNDTSGVTEMPPCGGSEKQAAVSSGSDYDVDGAEDGLGSVSSKDDRRSQSVDAELPMQEKVHIEKQPRRKRPRTKSHQNRVGEVGQFPAPSPLNPLPDINQLDAQLVEHNEMINGSIPPTEEDIAIQTHLAGTTDFNHLLGLGSEDVISTQSMFVDGRPLLGPPIQNTEMHHGGSYNAYHHYNPLVDYQSQIGMERQQTQIQSQIGMEGQQPQIRAENGGPPGNEVVVNGGGDLNYFGNHSEPDRPVDTQFGSPINSLSIFGGFSDSPFNLGIDGMGLFDDLLPDDLKTDDFVLDEEDMIQCFGS 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 603819 606866 - Conep18aG0011800.1 Cone18ag0117 457078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0117 601 MobiDBLite consensus disorder prediction 62 86 - -
Cone18ag0117 601 MobiDBLite consensus disorder prediction 288 390 - -
Cone18ag0117 601 MobiDBLite consensus disorder prediction 334 361 - -
Cone18ag0117 601 Pfam Ethylene insensitive 3, DNA-binding domain 40 288 IPR047091 GO:0003700(InterPro)
Cone18ag0117 601 Gene3D - 160 299 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone18ag0117 601 Gene3D - 75 151 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone18ag0117 601 MobiDBLite consensus disorder prediction 288 302 - -
Cone18ag0117 601 FunFam Ethylene insensitive 3-like 1 162 298 - -
Cone18ag0117 601 SUPERFAMILY DNA-binding domain of EIN3-like 169 291 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone18ag0117 601 FunFam Ethylene insensitive 3-like 1 75 153 - -
Cone18ag0117 601 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 555 IPR006957 GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0117 Cone-Chr18:603819 Cone5ag0446 Cone-Chr5:1893514 4.89E-111 dispersed
Cone11ag1473 Cone-Chr11:10471156 Cone18ag0117 Cone-Chr18:603819 6.68e-314 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45133 PF02926 THUMP 2.20E-13 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0117 K14514 - csv:101210347 675.626