Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0162 ATGGGTGTCTCGGGAAAATGGATTAAAGCCTTGGTCGGTTTTAAGAAATCCGAAAAATCACCTCCTTCAGAGAAGGGTGAAAATAACACATCTGGAATCAAGTTTCTGCATCGGAAAAAGAATTCGGTTGAGATTGATGCAGACACACAGAAGTATGGGTTTGATCAACAGTACAACCCATTAGTTGGAGAAGTTAATACCCATTCAAATCCAGATGCTGCTGGTTCGCCTTCTAATTCACTTCCTTTACATGGAAAGTCACATAGTCAGTTGATTGATAGAGAAGAATGGGCTGCCACACGCATCCAAACAGCCTTCCGAGGATTTCTGGCTAAAAGAGCTCTCCGAGCTTTGAAAGGATTAGTAAGACTTCAAGCTCTTGTCAGGGGACATGCTGTCAGAAAACAAGCTGCTATAACTCTTCGCTGTATGCAAGCTTTAGTGAGAGTCCAGGCTCGTGTACGTGCAAGGCGTGTTCGTCTTGCACTAGAAAGTGAAATAACGCAACAAAACCTTCAACAACAACAACATGAGAATCAAGCACGCGTTCGAGAAATTGAAGAAGGGTGGTGTGATAGTGTAGGATCGGTCGAACAAATTCAAGCCAAGTTGTTGAAGAGGCAGGAGGCTGCAGCTAAGCGCGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAAGCAGGATCAAGGCAGCAATCTACTCCTGGGTATGAACCTGATAAAAGCGGGTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTTCGTCCATGGGAAAACCGTTTTCTAGATATTAATCTAAGAGATGGAATGATGGTAAGTAAGAATGGATCAGTTGAAGATAAAAGTAATATCGGCATTCAATCTCAGGTAAAACCCGCTACTGGCAAGAAGCCAAATGTATCAACTGTTCATTCAAATATCTCAAGCCAGAAAACAGGCCCCTCCCACTCAGATGGATGTGGGTCTTCTTCACCAAATAAGACAGCAAGCACGGTAGAACAGAGGGGGGCCCAGTTTTCAAAGCCAAAGTTCAAGCCTCTTGATGAAAATACAGTTAAAGAAGCCAACTCAAGATCCAAAAGCAATCCAAAAGAGAGATCCAGATTACCCAGTAAACAGGCCAAAAAGCGTTTATCTCTTCCTAATAGTGGTGGAAGTCTGGGAACACGGCTCTCTATCAAGGATAAATCCAAGCTCAATGGAAGAATCGAACCGAACACTGCAGAATCTATCCCAAAAGCCATTGATACATAG 1260 43.81 MGVSGKWIKALVGFKKSEKSPPSEKGENNTSGIKFLHRKKNSVEIDADTQKYGFDQQYNPLVGEVNTHSNPDAAGSPSNSLPLHGKSHSQLIDREEWAATRIQTAFRGFLAKRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESEITQQNLQQQQHENQARVREIEEGWCDSVGSVEQIQAKLLKRQEAAAKRERAMAYALAHQWQAGSRQQSTPGYEPDKSGWGWNWLERWMAVRPWENRFLDINLRDGMMVSKNGSVEDKSNIGIQSQVKPATGKKPNVSTVHSNISSQKTGPSHSDGCGSSSPNKTASTVEQRGAQFSKPKFKPLDENTVKEANSRSKSNPKERSRLPSKQAKKRLSLPNSGGSLGTRLSIKDKSKLNGRIEPNTAESIPKAIDT 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 847631 851375 + Conep18aG0016500.1 Cone18ag0162 457123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0162 419 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515(InterPro)
Cone18ag0162 419 MobiDBLite consensus disorder prediction 348 371 - -
Cone18ag0162 419 MobiDBLite consensus disorder prediction 284 339 - -
Cone18ag0162 419 FunFam IQ-domain 11 94 145 - -
Cone18ag0162 419 MobiDBLite consensus disorder prediction 284 419 - -
Cone18ag0162 419 ProSiteProfiles IQ motif profile. 119 146 - -
Cone18ag0162 419 Gene3D - 95 137 - -
Cone18ag0162 419 ProSiteProfiles IQ motif profile. 95 123 - -
Cone18ag0162 419 MobiDBLite consensus disorder prediction 63 86 - -
Cone18ag0162 419 Coils Coil 160 180 - -
Cone18ag0162 419 MobiDBLite consensus disorder prediction 16 35 - -
Cone18ag0162 419 MobiDBLite consensus disorder prediction 378 392 - -
Cone18ag0162 419 PANTHER IQ-DOMAIN 5-RELATED 5 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0011 Cone-Chr15:93865 Cone18ag0162 Cone-Chr18:847631 1.66E-17 dispersed
Cone18ag0162 Cone-Chr18:847631 Cone20ag0275 Cone-Chr20:1221713 5.43E-46 dispersed
Cone1ag0388 Cone-Chr1:3380608 Cone18ag0162 Cone-Chr18:847631 4.02E-141 wgd
Cone11ag1428 Cone-Chr11:10201611 Cone18ag0162 Cone-Chr18:847631 1.10E-229 wgd
Cone14ag1038 Cone-Chr14:8768237 Cone18ag0162 Cone-Chr18:847631 4.80E-27 wgd
Cone18ag0162 Cone-Chr18:847631 Cone5ag1312 Cone-Chr5:7581605 2.86E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0162 - - - 0.0