Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0213 ATGGAATTTCTAGAGTCCATGACAACGACCTTCTGCATCGTCTTCTTCTCCTTCACATGCACGTTTTCTGCCTTTTCTCTGTTCATCTTCATCACGAGAATCAGACCATGGTGCAACTGCGAAGTCTGCAAAGACTACATGTCTTGCAGCTGGGTGAAACGACACGACAACTTCTGCGACTGGTATTCTCACCTTCTCAGAAAATCCCCGACCGGGACCATCCACGTTCACGTCCTGAGCAACATCATCACGGCAAACCCAGAAAATGTCGAGTATATTTTGAAGACCAATTTCGAAAACTACCCAAAAGGCAAGCCCTTTTCTGCAATCCTCGGCGATCTTTTGGGCCGCGGGATTTTCAACGTCGACGGCGATTCCTGGAAATTCCAACGCAAAATGGCCAGTTTAGAACTCGGCAGCGTTTCCGTTCGTTCCTACGCTTTTGAGATCGTCGGCTCCGAGATCCAGTCGCGATTAATTCCTCTTCTCGCTGAATTTTCCGCCAAAAAAAATGGCGCGAATCCCAACGGTCATTTGGATTTACAAGAAGTTTTCCGACGGTTTTCTTTCGACAATATTTGCAAATTTTCGTTCGGGTTGGACCCGGGTTGTCTCAAACTGTCATTTCCGGTTTCGGATTTGGCGGTGGCTTTTGATTTTGCGTCGAGGCTTTCCGCCGAGAGAGGTATGTCTCCGTCGCCAATTATTTGGAAAATCAAACGGGCATTGAATTTAGGATCCGAGAAGAAATTAAAAGAAGCGATTAAAGTGGTTGATGCTTTTGCTAAGGAAATGCTCGAACAGCGACGGAAACTGGGTTTCTCGAATCAAAACGATCTCCTTTCACGATTTATGGGTTCGATAGACGACGACGTTTATCTACGAGATATAGTTGTCAGCTTCCTATTGGCTGGTCGTGACACGGTGGCTTCCGCTTTGACTAGCTTCTTCTGGTTGTTATCACAGAATTTGGATGTTGAATCCAAGATCTTGGAAGAGTCAAATCGGGTTTTCGGGTCGGGTAATGTTGACATGCCCGCTAGCTATGAAAATATCCGAGAGATGCATTATTTGCATGCGGCCGTTTATGATAGTATGAGACTTTATCCTCCGGTTCAGTTTGATTCCAAATTTGCTGGAGACGACGACGTTTTACCGGATGGGACTTTTGTGAAAAAAGGTACAAGGGTAACTTACCATCCCTACGCGATGGGAAGGATGGAGCGGGTGTGGGGCCCGGATTGTTTGGAGTTCAAGCCAGAAAGATGGTTGAAGGACGGGGTTTTCTCGCCCGAGAACCCGTTCAAGTATCCGGTTTTTCAAGCCGGGTTGCGGGTTTGTTTAGGGAAGGAATTGGCGGTCATGGAGATGAAAAGTGTAGTTGTAGCTCTCGTAAGACGGTTCAAGATACGAGCTATTAGGGCAGACCGGGTTCCCCGGTTTGCCCCCGGTCTCACCGCTAGCCTGAGAGTGGGGCTTCCGGTCCAAATCGAAGAGAGAAGAACGTGA 1509 47.58 MEFLESMTTTFCIVFFSFTCTFSAFSLFIFITRIRPWCNCEVCKDYMSCSWVKRHDNFCDWYSHLLRKSPTGTIHVHVLSNIITANPENVEYILKTNFENYPKGKPFSAILGDLLGRGIFNVDGDSWKFQRKMASLELGSVSVRSYAFEIVGSEIQSRLIPLLAEFSAKKNGANPNGHLDLQEVFRRFSFDNICKFSFGLDPGCLKLSFPVSDLAVAFDFASRLSAERGMSPSPIIWKIKRALNLGSEKKLKEAIKVVDAFAKEMLEQRRKLGFSNQNDLLSRFMGSIDDDVYLRDIVVSFLLAGRDTVASALTSFFWLLSQNLDVESKILEESNRVFGSGNVDMPASYENIREMHYLHAAVYDSMRLYPPVQFDSKFAGDDDVLPDGTFVKKGTRVTYHPYAMGRMERVWGPDCLEFKPERWLKDGVFSPENPFKYPVFQAGLRVCLGKELAVMEMKSVVVALVRRFKIRAIRADRVPRFAPGLTASLRVGLPVQIEERRT 502
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 1052733 1054536 + Conep18aG0021600.1 Cone18ag0213 457174
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0213 502 SUPERFAMILY Cytochrome P450 56 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone18ag0213 502 CDD CYP86A 70 493 - -
Cone18ag0213 502 Gene3D Cytochrome P450 48 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone18ag0213 502 PANTHER CYTOCHROME P450 32 481 - -
Cone18ag0213 502 Pfam Cytochrome P450 51 481 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone18ag0213 502 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone18ag0213 502 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone18ag0213 502 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone18ag0213 502 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone18ag0213 502 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone18ag0213 502 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone18ag0213 502 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone18ag0213 502 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0213 Cone-Chr18:1052733 Cone2ag0970 Cone-Chr2:35224812 5.34E-137 dispersed
Cone11ag1370 Cone-Chr11:9950948 Cone18ag0213 Cone-Chr18:1052733 0 wgd
Cone13ag1195 Cone-Chr13:9264743 Cone18ag0213 Cone-Chr18:1052733 2.06E-218 wgd
Cone18ag0213 Cone-Chr18:1052733 Cone19ag1179 Cone-Chr19:8279317 3.77E-216 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0213 K20624 - gmx:100813091 727.243