Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone18ag0213 | ATGGAATTTCTAGAGTCCATGACAACGACCTTCTGCATCGTCTTCTTCTCCTTCACATGCACGTTTTCTGCCTTTTCTCTGTTCATCTTCATCACGAGAATCAGACCATGGTGCAACTGCGAAGTCTGCAAAGACTACATGTCTTGCAGCTGGGTGAAACGACACGACAACTTCTGCGACTGGTATTCTCACCTTCTCAGAAAATCCCCGACCGGGACCATCCACGTTCACGTCCTGAGCAACATCATCACGGCAAACCCAGAAAATGTCGAGTATATTTTGAAGACCAATTTCGAAAACTACCCAAAAGGCAAGCCCTTTTCTGCAATCCTCGGCGATCTTTTGGGCCGCGGGATTTTCAACGTCGACGGCGATTCCTGGAAATTCCAACGCAAAATGGCCAGTTTAGAACTCGGCAGCGTTTCCGTTCGTTCCTACGCTTTTGAGATCGTCGGCTCCGAGATCCAGTCGCGATTAATTCCTCTTCTCGCTGAATTTTCCGCCAAAAAAAATGGCGCGAATCCCAACGGTCATTTGGATTTACAAGAAGTTTTCCGACGGTTTTCTTTCGACAATATTTGCAAATTTTCGTTCGGGTTGGACCCGGGTTGTCTCAAACTGTCATTTCCGGTTTCGGATTTGGCGGTGGCTTTTGATTTTGCGTCGAGGCTTTCCGCCGAGAGAGGTATGTCTCCGTCGCCAATTATTTGGAAAATCAAACGGGCATTGAATTTAGGATCCGAGAAGAAATTAAAAGAAGCGATTAAAGTGGTTGATGCTTTTGCTAAGGAAATGCTCGAACAGCGACGGAAACTGGGTTTCTCGAATCAAAACGATCTCCTTTCACGATTTATGGGTTCGATAGACGACGACGTTTATCTACGAGATATAGTTGTCAGCTTCCTATTGGCTGGTCGTGACACGGTGGCTTCCGCTTTGACTAGCTTCTTCTGGTTGTTATCACAGAATTTGGATGTTGAATCCAAGATCTTGGAAGAGTCAAATCGGGTTTTCGGGTCGGGTAATGTTGACATGCCCGCTAGCTATGAAAATATCCGAGAGATGCATTATTTGCATGCGGCCGTTTATGATAGTATGAGACTTTATCCTCCGGTTCAGTTTGATTCCAAATTTGCTGGAGACGACGACGTTTTACCGGATGGGACTTTTGTGAAAAAAGGTACAAGGGTAACTTACCATCCCTACGCGATGGGAAGGATGGAGCGGGTGTGGGGCCCGGATTGTTTGGAGTTCAAGCCAGAAAGATGGTTGAAGGACGGGGTTTTCTCGCCCGAGAACCCGTTCAAGTATCCGGTTTTTCAAGCCGGGTTGCGGGTTTGTTTAGGGAAGGAATTGGCGGTCATGGAGATGAAAAGTGTAGTTGTAGCTCTCGTAAGACGGTTCAAGATACGAGCTATTAGGGCAGACCGGGTTCCCCGGTTTGCCCCCGGTCTCACCGCTAGCCTGAGAGTGGGGCTTCCGGTCCAAATCGAAGAGAGAAGAACGTGA | 1509 | 47.58 | MEFLESMTTTFCIVFFSFTCTFSAFSLFIFITRIRPWCNCEVCKDYMSCSWVKRHDNFCDWYSHLLRKSPTGTIHVHVLSNIITANPENVEYILKTNFENYPKGKPFSAILGDLLGRGIFNVDGDSWKFQRKMASLELGSVSVRSYAFEIVGSEIQSRLIPLLAEFSAKKNGANPNGHLDLQEVFRRFSFDNICKFSFGLDPGCLKLSFPVSDLAVAFDFASRLSAERGMSPSPIIWKIKRALNLGSEKKLKEAIKVVDAFAKEMLEQRRKLGFSNQNDLLSRFMGSIDDDVYLRDIVVSFLLAGRDTVASALTSFFWLLSQNLDVESKILEESNRVFGSGNVDMPASYENIREMHYLHAAVYDSMRLYPPVQFDSKFAGDDDVLPDGTFVKKGTRVTYHPYAMGRMERVWGPDCLEFKPERWLKDGVFSPENPFKYPVFQAGLRVCLGKELAVMEMKSVVVALVRRFKIRAIRADRVPRFAPGLTASLRVGLPVQIEERRT | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 1052733 | 1054536 | + | Conep18aG0021600.1 | Cone18ag0213 | 457174 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone18ag0213 | 502 | SUPERFAMILY | Cytochrome P450 | 56 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0213 | 502 | CDD | CYP86A | 70 | 493 | - | - | |
| Cone18ag0213 | 502 | Gene3D | Cytochrome P450 | 48 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0213 | 502 | PANTHER | CYTOCHROME P450 | 32 | 481 | - | - | |
| Cone18ag0213 | 502 | Pfam | Cytochrome P450 | 51 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0213 | 502 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0213 | 502 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0213 | 502 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0213 | 502 | PRINTS | P450 superfamily signature | 447 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0213 | 502 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0213 | 502 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0213 | 502 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0213 | 502 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone18ag0213 | Cone-Chr18:1052733 | Cone2ag0970 | Cone-Chr2:35224812 | 5.34E-137 | dispersed | |
| Cone11ag1370 | Cone-Chr11:9950948 | Cone18ag0213 | Cone-Chr18:1052733 | 0 | wgd | |
| Cone13ag1195 | Cone-Chr13:9264743 | Cone18ag0213 | Cone-Chr18:1052733 | 2.06E-218 | wgd | |
| Cone18ag0213 | Cone-Chr18:1052733 | Cone19ag1179 | Cone-Chr19:8279317 | 3.77E-216 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone18ag0213 | K20624 | - | gmx:100813091 | 727.243 |