Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag0217 | ATGGGAACGCTCATCAATACATCTGAAATAGTTGAGTCAGTGGAAGAATCAGATTCTGGAGTAGAAACAAACGGAAAAGATGCAAATCACTATATGCAAAACTCTGGAAAAAGGTGTTCGATAGAGGATGATATCAATCGTCTATTTCAGGGAATAGACATCAGAACGTCAAGTAGAGATGCTTTGCGAAAAAGTGCAATGAAAAGGCCAATTAGACCGAGTTCATCTCAAGTGTCTGGGATTGGAATTTCCGAGCCAGTGAGTTTAAAACAGGCTCTAAGAGGGTTGTGTGTCTCTCAGGCAGCAGAAACGGCTGCTATGAAGAGATTATCAAGGTCCACGCGATCTTCAGGAGTATCAGAATCCGGAACAATAAAAAAGTTGTACAGGGCAGTTGTAGTTGAGGCTGATGGATCTAGTGTTTCTATAAATGTTAAAGGTAAGGGGAATTTGGTTGAGTTCACCCTTGTTCCTGACCCCATCGGTTCAACTTTTTCGAGGGAGATTTCTGAATCCTTAGAGAATTCTTCCAAGGCAGAGCCATCAAATTCAGGGTCTAACAATTCTTATCCTTTGGATGATTCACCAAAACAAAAGACTAACTTACAAATGGAGGTAGGGTCTGAGTTACCAAAGGAAGAGGTTGAAAAACTGAAATCGATCGAACCTTCTTCCGTTTCACATTCCGGCAAAAAAGTCCTACCACTGGATGAAAGTAAGCCAAGCAAATCGAATTGCAATAGTCCACGTTTAATCAAGCCTTTATTCAGGACCAAGAGTTTCGTGAAGAAGAAGGCAAAGCTGGAATCAAGCGCTTCCTCCAGTGCTTCCAATCCATGTCTGGGAAAATCTGACACTGACTTGGGTCCCGCTACAAATGATTTGGGGGTCCAGATGCCTTCTGATACTCTCAATCATGAAAACATGGGAATTGACAAAGCTTCACTGGAGAGCAGTGAGGTCAGGTCAAGTATGATGGAAAGGAGTTTAATTAGACCTGGTCTCTCTTCTAGTTGCAATAACAGAACTAGATCACTAGGAACAAACTCTGATGAGACATCAAGATTCAGAGAAAAGGGTGAGTTCTCCCAAAGCTCAAAAAGCAGTATCGGCGATTTTAGCAGTAGCCCAAGCATTAGTGGTGAGATCATTCTCAGTTGGTCTAGTCGAAGCGGGAATAGGGCCCACCTGTCAAAAGACTTGAGATGGGAAGCCATCCACCATGTTCAAAAGCAGCATCAATCTGTGGGTTTCAAAGACTTTAAGATTCTTAGGAGGCTAGGTCTTGGGGATATAGGGTCTGTGTACCTTGCTGAACTAAGCGATACCAGATGTCTGTTTGCTTTGAAAGTGATGGATATGGATTTTTTGACGAGTAGGAAGAAAATTCTCAGAGCCCAAACGGAGAAAGAGATTCTTCAAATTCTGGACCACCCTTTTCTCCCTACTCTTTACGCCCATTTCGAAACAGATAAGCAATCATGCTTAGTCATTGACTATTGTCCAGGTGGAGATTTACATGTTCTCCGGCAAAAGCAACATGGCCGGAATTTCTCTGAGCAAGCAACCAGATTCTATGTTGCTGAAATTCTCCTTGCCCTAGAGTATTTGCACATGCTAGGAGTTGTGTACAGGGACCTCAAACCGGAAAACATCTTGGTCCGAGAAGATGGTCACATTATGCTCACAGATTTCGACTTATCACTCAGATGCACAGCCAATACAATGGTTGTGCTTAAATCATCTTCCCCCACCAGGGAGCCCACAAAAAAGACCCATTATCCATGTGATGGATCTTCTTGCATCGACCCTTTCTGTCTTCAACCATCCTGGCAAGTCCCATGTTTCACTCCTAGGCTTCTCATAACCTCGACACCACCAAAAACCCGGAAGATGAAATCTGACCCATTGGCCCAAGTCAGCCCACTTCCTCAGCTTGTAGTGGAGCCCACTGGGGCCCGATCCAACTCGTTCGTTGGAACCTATGAATACCTTGCTCCTGAAATCATAAAAAACGATGGGCATGGTAGTGCTGTTGATTGGTGGACTTACGGGATTTTTCTGTTCGAGCTACTGTATGGTAAGACTCCCTTTAAAGGGCCCGGAAATGATGAAACTTTAGCAAACATAGTGTCACAAAGCCTCAGGTTTCCAAATAGCCCTATTGTTAGTTTTCATGCACGGGACTTGATCCGCGCCCTACTGGTGAAGGAACCTGAAAATCGGTTAGGGTCTGTGAAAGGAGCGGTAGAGATAAAGCAACATCCTTTCTTCGATGGGCTTAATTGGGCTCTGATTCGGTGTGCTGTTCCCCCCGAGCTGCCCAAGTTTTCTGATTTCGGAATCGGTGGACCGCAGTTAATAGGCTTGTGGAAAAAGGATGGACCTAAGCAAAGAGAAGTTGAAAATATGGGAGTAGATGATCCAGTGTTTGAGATGTTTTAG | 2445 | 44.05 | MGTLINTSEIVESVEESDSGVETNGKDANHYMQNSGKRCSIEDDINRLFQGIDIRTSSRDALRKSAMKRPIRPSSSQVSGIGISEPVSLKQALRGLCVSQAAETAAMKRLSRSTRSSGVSESGTIKKLYRAVVVEADGSSVSINVKGKGNLVEFTLVPDPIGSTFSREISESLENSSKAEPSNSGSNNSYPLDDSPKQKTNLQMEVGSELPKEEVEKLKSIEPSSVSHSGKKVLPLDESKPSKSNCNSPRLIKPLFRTKSFVKKKAKLESSASSSASNPCLGKSDTDLGPATNDLGVQMPSDTLNHENMGIDKASLESSEVRSSMMERSLIRPGLSSSCNNRTRSLGTNSDETSRFREKGEFSQSSKSSIGDFSSSPSISGEIILSWSSRSGNRAHLSKDLRWEAIHHVQKQHQSVGFKDFKILRRLGLGDIGSVYLAELSDTRCLFALKVMDMDFLTSRKKILRAQTEKEILQILDHPFLPTLYAHFETDKQSCLVIDYCPGGDLHVLRQKQHGRNFSEQATRFYVAEILLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCTANTMVVLKSSSPTREPTKKTHYPCDGSSCIDPFCLQPSWQVPCFTPRLLITSTPPKTRKMKSDPLAQVSPLPQLVVEPTGARSNSFVGTYEYLAPEIIKNDGHGSAVDWWTYGIFLFELLYGKTPFKGPGNDETLANIVSQSLRFPNSPIVSFHARDLIRALLVKEPENRLGSVKGAVEIKQHPFFDGLNWALIRCAVPPELPKFSDFGIGGPQLIGLWKKDGPKQREVENMGVDDPVFEMF | 814 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 1076442 | 1078977 | + | Conep18aG0022000.1 | Cone18ag0217 | 457178 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag0217 | 814 | Gene3D | Transferase(Phosphotransferase) domain 1 | 653 | 776 | - | - | |
Cone18ag0217 | 814 | FunFam | serine/threonine-protein kinase D6PK-like | 505 | 572 | - | - | |
Cone18ag0217 | 814 | Gene3D | Phosphorylase Kinase; domain 1 | 419 | 500 | - | - | |
Cone18ag0217 | 814 | CDD | STKc_phototropin_like | 419 | 781 | - | - | |
Cone18ag0217 | 814 | ProSiteProfiles | Protein kinase domain profile. | 421 | 758 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone18ag0217 | 814 | MobiDBLite | consensus disorder prediction | 333 | 350 | - | - | |
Cone18ag0217 | 814 | SMART | serkin_6 | 421 | 758 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone18ag0217 | 814 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 542 | 554 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone18ag0217 | 814 | MobiDBLite | consensus disorder prediction | 169 | 250 | - | - | |
Cone18ag0217 | 814 | MobiDBLite | consensus disorder prediction | 268 | 294 | - | - | |
Cone18ag0217 | 814 | Gene3D | Transferase(Phosphotransferase) domain 1 | 501 | 571 | - | - | |
Cone18ag0217 | 814 | MobiDBLite | consensus disorder prediction | 169 | 205 | - | - | |
Cone18ag0217 | 814 | Pfam | Protein kinase domain | 655 | 758 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone18ag0217 | 814 | Pfam | Protein kinase domain | 422 | 575 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone18ag0217 | 814 | MobiDBLite | consensus disorder prediction | 333 | 361 | - | - | |
Cone18ag0217 | 814 | MobiDBLite | consensus disorder prediction | 268 | 282 | - | - | |
Cone18ag0217 | 814 | FunFam | Serine/threonine-protein kinase D6PK-like | 419 | 504 | - | - | |
Cone18ag0217 | 814 | SUPERFAMILY | Protein kinase-like (PK-like) | 398 | 775 | IPR011009 | - | |
Cone18ag0217 | 814 | PANTHER | FLIPPASE KINASE 1-RELATED | 278 | 777 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cone18ag0217 | 814 | FunFam | serine/threonine-protein kinase D6PK-like | 653 | 776 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag0217 | Cone-Chr18:1076442 | Cone3ag0209 | Cone-Chr3:1113014 | 7.97E-231 | dispersed | |
Cone1ag0527 | Cone-Chr1:5199629 | Cone18ag0217 | Cone-Chr18:1076442 | 9.12E-126 | wgd | |
Cone10ag0177 | Cone-Chr10:861393 | Cone18ag0217 | Cone-Chr18:1076442 | 2.16E-225 | wgd | |
Cone11ag1025 | Cone-Chr11:8118512 | Cone18ag0217 | Cone-Chr18:1076442 | 1.81E-23 | wgd | |
Cone11ag1361 | Cone-Chr11:9912074 | Cone18ag0217 | Cone-Chr18:1076442 | 0 | wgd | |
Cone13ag1200 | Cone-Chr13:9287179 | Cone18ag0217 | Cone-Chr18:1076442 | 3.57E-194 | wgd | |
Cone18ag0217 | Cone-Chr18:1076442 | Cone19ag1184 | Cone-Chr19:8299360 | 3.54E-201 | wgd | |
Cone18ag0217 | Cone-Chr18:1076442 | Cone5ag1353 | Cone-Chr5:8149607 | 4.80E-129 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82306 | PF02469 | Fasciclin | 2.20E-07 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag0217 | - | - | - | 0.0 |