Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0218 ATGAAGGTATTATTCAATAGAGTGCATACCAATCTAGAATCACCAATTCGCTTCCATTTTCACTCTTCTTCTTCTTCTTCTTCATCGCCTCCATCTCTTCTTCTCCTTCCGCTAATAATCCAATACCCAAATCTTCAAAAGTCAATCTCTTCTTCTCCAGATCCCCACACAACCCACCTGTCTTCTCCATTTCTAACCAGAGCTTCAATGGCTGCTGCTTCTAGTAATCCATCAGATACAGAGACCAAAAAGCCCTTCTCTATTCTGTTTGTGTGCTTAGGCAACATTTGCAGAAGCCCAGCTGCTGAAGGAATTTTCACGGACTTGGTGAAGAAAAGGGGTTTAGATTTCAAGTTCAAGATTGATTCTGCTGGCACCATTAACTACCACGAGGGGAATCCAGCGGATCCCAGAATGAGAGCGGCCTCAAAGAGTAGAGGGATAGAGATAACATCTATCTCGAGGCCGCTCCGGCCCTCCGATTTTAGAGATTTTGATCTTATTGTTGCTATGGACAAGCAAAACAGAGAGGACATATTGGAGACATATGAGAGGTGGAGATTCAGAGAAACCTTCCCTCCTGAAGCACACAAAAAGGTGAAGCTGATGTGTTCTTATTGCAAGAAACATGGTGAAACTGAAGTTCCGGATCCTTATTATGGCGGAGCACAAGGTTTCGAGAAGGTATTGGACTTGCTTGAAGATGCCTGTGAATCACTGCTGGATAGCATCTTGACAGAGAACAAACATATTCTGGAATCTTAA 765 43.27 MKVLFNRVHTNLESPIRFHFHSSSSSSSSPPSLLLLPLIIQYPNLQKSISSSPDPHTTHLSSPFLTRASMAAASSNPSDTETKKPFSILFVCLGNICRSPAAEGIFTDLVKKRGLDFKFKIDSAGTINYHEGNPADPRMRAASKSRGIEITSISRPLRPSDFRDFDLIVAMDKQNREDILETYERWRFRETFPPEAHKKVKLMCSYCKKHGETEVPDPYYGGAQGFEKVLDLLEDACESLLDSILTENKHILES 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1079711 1080893 + Conep18aG0022100.1 Cone18ag0218 457179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0218 254 PRINTS LMW phosphotyrosine protein phosphatase signature 88 105 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Cone18ag0218 254 PRINTS LMW phosphotyrosine protein phosphatase signature 131 147 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Cone18ag0218 254 PRINTS LMW phosphotyrosine protein phosphatase signature 215 230 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Cone18ag0218 254 Gene3D - 68 249 - -
Cone18ag0218 254 FunFam Low molecular weight protein-tyrosine-phosphatase 85 249 - -
Cone18ag0218 254 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 68 250 IPR052995 -
Cone18ag0218 254 CDD LMWPTP 87 242 - -
Cone18ag0218 254 SUPERFAMILY Phosphotyrosine protein phosphatases I 84 244 IPR036196 -
Cone18ag0218 254 Pfam Low molecular weight phosphotyrosine protein phosphatase 88 241 IPR023485 -
Cone18ag0218 254 SMART LMWPc_2 86 243 IPR023485 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1360 Cone-Chr11:9910446 Cone18ag0218 Cone-Chr18:1079711 1.03E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0218 K25307 - vvi:100253402 322.398