Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0258 ATGGAGAAATCTGGTTACGGTCGAGACGGAATTTTCCGGTCACTTCGACCCCAAATCCGATTCCCTACCGACCCTAACGTCTCCATGGTCTCCTTCCTCTTCAGAGACTTGTCATCTTACCCCAACAAACCCGCCTTAATCGACGCTGAATCTTCTGAAACAATCTCCTTCTCCCACCTCAAATCTTTAGTTATCAGAGCCTCCCATGGCTTCCTCCACCGCCTCGGCATCACCAAGAACGACGTCGTTCTCATCTTCGCTCCCTCCTCCATCCATTACCCCGTCTGCTTCTTCTCAATCATCGCCGTTGGAGCCATCGCCACCACCTGCAACCCTACCTACACTGTCGCCGAGCTCACCAAACAAATCAAGGACTCCAAGCCCAAAGTTATCGTCACTATTCCTCAATTATGGGATAAAGTCAAGGATTTGAATCTCCCTACAGTCTTTCTTGGTAACACAGATTCATCATCTTCAATCAAATCGGATTCGACCGTCATAAATTTCCACGATTTGCTCGATTTATCTGTTCCGGCGGTTTCAGATTTCCCGACGGTTGATATAAAGCAAACAGATACAGCGGCGCTTTTGTATTCTTCGGGAACAACTGGGATTTCTAAAGGTGTGGTTTTAACGCATAGGAACTTCATAACGGCATCGTTAATGGTCACTATCGATCAAGAGACATCAGGTGAGAAACACAGTGTGTTCCTTAACGTCTTGCCCATGTTTCATGTGTTCGGTTTGGCCTGTATTTCTTACGCTCAGCTTCAGATGGGGAATGCGATTGTGGTTATGGCTAAGTTTGACTTTGAGAAAATGTTGTCGGCTATAGAGAGGTATAAGGTGACGGATTTGTGGATTGTGCCGCCTATTGTTCTTGCTCTGGCAAAACAGAGTGTGGTGAAGAAATATGATCTTTCTTCTTTGAAGGCTGTTGGTTCTGGGGCTGCTCCTTTGGGTAAGGATTTGATGGAGGAATGTTCTAGGAATATCCCAAGTGCTGTGGTTATTCAGGGCTATGGTATGACCGAAACTTGTGGGGTGGTGTCGTTAGAAAATGCATTTCTCGGAATCCGGAATTCGGGGTCGGCTGGGACACTAGCTTCAGGTGTTGAAGCTCAAATAGTAAGTGTTGATTCATTGAAGCCTCTTCCTCCTACCAAACTCGGTGAGATTTGGGTCCGTGGACCTTGTATGATGAAAGGTTATTTGAACAATCCACGGGCCACTAGGGAAACCATTGATAGAAACGGGTGGGTCCATACCGGAGATCTCGGATATTTTGATGAAAATGGGCATCTTTTTGTTGTTGATCGAATTAAGGAGCTGATCAAGTATAAAGGCTTTCAGGTGGCACCAGCTGAACTTGAAGGTCTGCTCGTATCTCACCCTGAAATATTAGATGCCGTTGTCATCCCATTTCCAGATGCTGAAGCTGGTGAGGTCCCAATCGCATACGTCGTTCATTCTCCAAACGCTTCTCTAACCGAAAACGACGTTCTGAAATTTATCGCTAATCAGGTTGCTCCATTCAAACGGCTACGGAAAGTGACGTTTGTTAACAGCATCCCCAAATCGGTTTCAGGGAAAATTCTTAGAAGAGAGCTGATCCAGAAAGTTCGATCCAAAATCTGA 1638 45.85 MEKSGYGRDGIFRSLRPQIRFPTDPNVSMVSFLFRDLSSYPNKPALIDAESSETISFSHLKSLVIRASHGFLHRLGITKNDVVLIFAPSSIHYPVCFFSIIAVGAIATTCNPTYTVAELTKQIKDSKPKVIVTIPQLWDKVKDLNLPTVFLGNTDSSSSIKSDSTVINFHDLLDLSVPAVSDFPTVDIKQTDTAALLYSSGTTGISKGVVLTHRNFITASLMVTIDQETSGEKHSVFLNVLPMFHVFGLACISYAQLQMGNAIVVMAKFDFEKMLSAIERYKVTDLWIVPPIVLALAKQSVVKKYDLSSLKAVGSGAAPLGKDLMEECSRNIPSAVVIQGYGMTETCGVVSLENAFLGIRNSGSAGTLASGVEAQIVSVDSLKPLPPTKLGEIWVRGPCMMKGYLNNPRATRETIDRNGWVHTGDLGYFDENGHLFVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVIPFPDAEAGEVPIAYVVHSPNASLTENDVLKFIANQVAPFKRLRKVTFVNSIPKSVSGKILRRELIQKVRSKI 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1244953 1247515 + Conep18aG0026300.1 Cone18ag0258 457219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0258 545 Gene3D - 443 544 IPR045851 -
Cone18ag0258 545 Pfam AMP-binding enzyme 36 405 IPR000873 -
Cone18ag0258 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 537 - GO:0016405(PANTHER)
Cone18ag0258 545 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
Cone18ag0258 545 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 442 - -
Cone18ag0258 545 FunFam 4-coumarate--CoA ligase 2 443 544 - -
Cone18ag0258 545 CDD 4CL 21 537 - -
Cone18ag0258 545 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Cone18ag0258 545 Gene3D - 9 442 IPR042099 -
Cone18ag0258 545 SUPERFAMILY Acetyl-CoA synthetase-like 22 542 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0258 Cone-Chr18:1244953 Cone3ag0722 Cone-Chr3:3690259 2.47E-231 dispersed
Cone11ag1319 Cone-Chr11:9727013 Cone18ag0258 Cone-Chr18:1244953 0 wgd
Cone13ag1252 Cone-Chr13:9513602 Cone18ag0258 Cone-Chr18:1244953 8.68E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0258 K01904 - mdm:103447296 801.201