Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag0273 | ATGGGTTATAATAATTCAAGATCCGTAAGATTCCGAGATGATGATGAATCATTAAAGCTTCCTACTAAGCTCAAGTTCAATATAGACGGGACGACTATAGCGGACTCGAGCAATGGGAAAGATGAGAGTCCTGTTTTATGGAAAGCCGGGAAATCCTTGAAAGCTAAAGTATTGTCTAGAGTCTTTTCTGAGGATTATGAGAGAGTGAAGAAGAAGATCTTGGACCCTAGAGGGGAAAAGATAAGGAGATGGAATAAGATCTTTCTAGTAGCTTCTTTAGTTTCTTTGTTTGTAGATCCTCTATTCTTTTACTTGCCAGTTGTCTCCGATGAGATGTGCATTCGAATAGGGTTCCGTCTTGAAGTTATTCTTACAACTATAAGATCCATAGCCGATGTTTTCTACTTGATCCATATCCTTATTAGATTCCGAACTGCTTATGTCGCACCTTCTTCCCGTGTTTTTGGAAGAGGAGAGATTGTCATAGACTCTTCCAAGATCGCCTTAAGGTATCTTCGCCAGGGTTTCTGGATCGACCTCGTTGCTGCTCTTCCCCTCCCACAGGTTGTGATTTGGATTGTCATTCCGAGCCTAGGTGGTTCTACAATGACAAACACTAAGAACTTCCTCCGGTTCATACTTATATTTCAGTATTTCCCAAGACTCTTCCTCATATTCCCTCTCTCCGCACAAATCGTTAAGGCAGCTGGTGTTGTCACACAAACGGCTTGGGCCGGTGCTGCTTATAATCTCATGCTTTACATGTTGGCAAGTCATGTTTTAGGAGCTTGTTGGTACCTTCTATCGATCGAACGGCAGGAAGATTGCTGGAGGAAAGTATGTGAGCTCAATCCCCAATCTTGTAATTATCATTTCTTCGATTGCAATGAAGTTGGCAAAACTAATAGGAGCTCTTGGTTTAAATCGAGTAATGTTACAAACTTATGCAACCCGGATGATAGCTTCTATTCCTTTGGAATATACGGTGATGCAACGACATATCATGTCACGACATCTACATTCTTCAAAAAGTACTTCTACTGTCTCTGGTGGGGCCTCAAGAATCTAAGTTCCTTAGGACAGAATCTTGCTACAAGCACTTATGTTGGAGAAATCGCATTCGCCATAATTGTTGCAACTCTCGGACTTGTTCTCTTTGGATTGCTCATTGGTAACATGCAAACATACCTCCAATCAACAACGGTCCGATTAGAAGAATGGAGGATAAAGAGAACAGATACGGAACAATGGATGCATCACCGTCAACTACCTCCAGAACTAAAACAATCCGTACGGAAATATGACCAGTACAAGTGGGTAGCAACTCGAGGAGTTGATGAGGAAGCTCTTCTCAAAGGCCTTCCTATGGATCTCAGAAGAGACATTAAACGCCACCTTTGTCTCGACCTTGTCCGAGGAGTCCCCTTGTTTGATCAAATGGATGAGAGAATGCTTGATGCGATATGTGAACGGCTTAAACCGGCTCTATACACGGAAGGCACGTTTCTTGTACGAGAAGGGGACCCCGTCAATGAAATGCTGTTTATTATCCGAGGCCACCTTGACTCTTACACTACTAATGGGGGACGGACTGGGTTCTTTAACTCATGTCGGATCGGACCCGGTGACTTTTGTGGCGAGGAGCTTCTAACGTGGGCCCTGGACCCACGTCCAGTTATCATCATACCCTCGTCTACCCGTACGGTCAAAGCTATTTCGGAAGTTGAGGCATTTGCTCTCATTGCAGAGGACTTAAAATTCGTAGCCTCACAATTTAGACGGCTTCATAGTAAACAACTCCGGCACAAGTTCCGGTTTTACTCACACCAGTGGAGAACGTGGGCTGCATGTTTCGTACAGGCAGCCTGGCGCAGGTATAAGAGACGGAAGGAAGCGTCGAAGCTCAGGGCTAGAGAGAAGTCTGTTGTTTCTGATGCGGTGGATTCGGCCCCACCACCTTTTTCGTATGTCTCGAGGTTGGCGGCTAGTTCTAGGTTGGCGGGAACTACGAGGAGGGTTGTTACTATGACACGTTCGGGTTCGGAATCCGAGGTTGTCAGCTCATTGCAAAAACCGGAAGAGCCGGACTTTTCGGTGGTTGAATGA | 2106 | 44.97 | MGYNNSRSVRFRDDDESLKLPTKLKFNIDGTTIADSSNGKDESPVLWKAGKSLKAKVLSRVFSEDYERVKKKILDPRGEKIRRWNKIFLVASLVSLFVDPLFFYLPVVSDEMCIRIGFRLEVILTTIRSIADVFYLIHILIRFRTAYVAPSSRVFGRGEIVIDSSKIALRYLRQGFWIDLVAALPLPQVVIWIVIPSLGGSTMTNTKNFLRFILIFQYFPRLFLIFPLSAQIVKAAGVVTQTAWAGAAYNLMLYMLASHVLGACWYLLSIERQEDCWRKVCELNPQSCNYHFFDCNEVGKTNRSSWFKSSNVTNLCNPDDSFYSFGIYGDATTYHVTTSTFFKKYFYCLWWGLKNLSSLGQNLATSTYVGEIAFAIIVATLGLVLFGLLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPPELKQSVRKYDQYKWVATRGVDEEALLKGLPMDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALYTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPVIIIPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRKEASKLRAREKSVVSDAVDSAPPPFSYVSRLAASSRLAGTTRRVVTMTRSGSESEVVSSLQKPEEPDFSVVE | 701 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 1321386 | 1325074 | + | Conep18aG0028000.1 | Cone18ag0273 | 457234 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag0273 | 701 | FunFam | Cyclic nucleotide-gated ion channel 1 | 474 | 592 | - | - | |
Cone18ag0273 | 701 | MobiDBLite | consensus disorder prediction | 678 | 701 | - | - | |
Cone18ag0273 | 701 | Gene3D | Jelly Rolls | 474 | 594 | IPR014710 | - | |
Cone18ag0273 | 701 | CDD | CAP_ED | 476 | 607 | IPR000595 | - | |
Cone18ag0273 | 701 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 56 | 662 | - | - | |
Cone18ag0273 | 701 | Gene3D | - | 93 | 400 | - | - | |
Cone18ag0273 | 701 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 476 | 573 | IPR000595 | - | |
Cone18ag0273 | 701 | SUPERFAMILY | Voltage-gated potassium channels | 76 | 398 | - | - | |
Cone18ag0273 | 701 | Pfam | Cyclic nucleotide-binding domain | 497 | 562 | IPR000595 | - | |
Cone18ag0273 | 701 | SMART | cnmp_10 | 476 | 607 | IPR000595 | - | |
Cone18ag0273 | 701 | Pfam | Ion transport protein | 84 | 403 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone18ag0273 | 701 | PRINTS | EAG/ELK/ERG potassium channel family signature | 256 | 266 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cone18ag0273 | 701 | PRINTS | EAG/ELK/ERG potassium channel family signature | 139 | 148 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cone18ag0273 | 701 | PRINTS | EAG/ELK/ERG potassium channel family signature | 371 | 382 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cone18ag0273 | 701 | PRINTS | EAG/ELK/ERG potassium channel family signature | 439 | 446 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cone18ag0273 | 701 | PRINTS | EAG/ELK/ERG potassium channel family signature | 345 | 362 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cone18ag0273 | 701 | PRINTS | EAG/ELK/ERG potassium channel family signature | 389 | 398 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Cone18ag0273 | 701 | FunFam | Cyclic nucleotide-gated ion channel 1 | 403 | 467 | - | - | |
Cone18ag0273 | 701 | Gene3D | Helix hairpin bin | 403 | 467 | - | - | |
Cone18ag0273 | 701 | ProSiteProfiles | IQ motif profile. | 612 | 641 | - | - | |
Cone18ag0273 | 701 | SUPERFAMILY | cAMP-binding domain-like | 406 | 602 | IPR018490 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone15ag0026 | Cone-Chr15:198240 | Cone18ag0273 | Cone-Chr18:1321386 | 2.88E-57 | dispersed | |
Cone18ag0273 | Cone-Chr18:1321386 | Cone2ag0610 | Cone-Chr2:3700486 | 1.25E-269 | dispersed | |
Cone11ag1306 | Cone-Chr11:9650037 | Cone18ag0273 | Cone-Chr18:1321386 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag0273 | K05391 | - | csv:101210775 | 1103.58 |