Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0309 ATGGATACGGAGAAGGAATCTATGGATATGGAGGAAACGAAAGGTGTTTCTACGTATGGAGGGAAATATGTTCAGTACAACATTCTCGGAAACATCTTTGAGGTCTCTGCCAAGTACGTCCCTCCTATTCAACCGGTTGGTCGTGGTGCATACGGCATCGTTTGCTGTGCTGTGAATTCCAAGACGAAAGAAGATGTTGCAATCAAGAAGATAGGGAATGCATTTGACAACAGGATTGATGCCAAGAGGACTCTTCGAGAGATCAAACTCCTTTGTCATATGGATCATGACAATGTAATCAAAATTAAGGATATCGTTGTACCACCCAAGAGGGAGAATTTCAATGATGTGTATATAGTATATGAATTATTGGATACTGATCTGCATCAGATAATTTTCTCTAACCAGGCTCTTACAGATGATCACTGTCAGTATTTCCTCTACCAACTATTGCGGGGTTTGAAATACATACACTCTGCCAATGTGTTGCACCGAGATCTAAAACCAAGCAACCTTCTTCTCAATGCAAATTGTGACCTCAAGATCTGTGATTTTGGGCTTGCAAGAACTACCTCAGAGACAGATTTTATGACCGAATATGTTGTAACACGCTGGTATAGAGCCCCTGAATTACTGCTAAACTGCTCTGAATACACTGCAGCAATTGATATCTGGTCAGTTGGGTGCATTCTCATGGAAATTATAAAAAGGGAACCGTTATTTCCTGGTAAAGACTATGTACAGCAATTGGGTCTTATAACCGAGCTACTAGGTTCGCCGGATGATACTGATCTTGGATTTCTGAGAAGTGATAATGCTAGAAAATATGTTAAGCAGCTTCCTTACGTCCCCAAGAAACCCTTTTCCGAAAAGTTTCCTGATGTTTCCCCATTGGCACTAGATCTTGCAGAGAAGATGCTAGTCTTTGATCCAAGCAAAAGAATAACTGTTGAGGAGGCATTGACTCACCCGTATTTAGTAAGTCTCCATGAGATCAATGAGGAGCCTACCTGCCCATCCCCCTTCGTCTTTGATTTTGAACAGACATCCTTGGATGAAGAAGATATCAAGGATCTTATATGGAAGGAATCTCTCAACTTCAACCCCGAATTTATGGAGGAGTAA 1125 41.24 MDTEKESMDMEETKGVSTYGGKYVQYNILGNIFEVSAKYVPPIQPVGRGAYGIVCCAVNSKTKEDVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNVIKIKDIVVPPKRENFNDVYIVYELLDTDLHQIIFSNQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIKREPLFPGKDYVQQLGLITELLGSPDDTDLGFLRSDNARKYVKQLPYVPKKPFSEKFPDVSPLALDLAEKMLVFDPSKRITVEEALTHPYLVSLHEINEEPTCPSPFVFDFEQTSLDEEDIKDLIWKESLNFNPEFMEE 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1516153 1518750 + Conep18aG0031600.1 Cone18ag0309 457270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0309 374 Pfam Protein kinase domain 44 326 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0309 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 33 362 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cone18ag0309 374 SMART serkin_6 40 326 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0309 374 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524(InterPro)
Cone18ag0309 374 Gene3D Transferase(Phosphotransferase) domain 1 124 353 - -
Cone18ag0309 374 SUPERFAMILY Protein kinase-like (PK-like) 43 332 IPR011009 -
Cone18ag0309 374 FunFam Mitogen-activated protein kinase 124 353 - -
Cone18ag0309 374 FunFam Mitogen-activated protein kinase 25 135 - -
Cone18ag0309 374 ProSiteProfiles Protein kinase domain profile. 40 326 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0309 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0309 374 ProSitePatterns MAP kinase signature. 75 178 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0309 374 CDD STKc_TEY_MAPK 33 369 - -
Cone18ag0309 374 Gene3D Phosphorylase Kinase; domain 1 23 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0287 Cone-Chr12:1551932 Cone18ag0309 Cone-Chr18:1516153 2.79E-188 dispersed
Cone14ag0377 Cone-Chr14:1764585 Cone18ag0309 Cone-Chr18:1516153 2.28E-215 dispersed
Cone15ag0414 Cone-Chr15:1946029 Cone18ag0309 Cone-Chr18:1516153 5.81E-135 dispersed
Cone17ag1359 Cone-Chr17:9508131 Cone18ag0309 Cone-Chr18:1516153 4.99E-148 dispersed
Cone18ag0309 Cone-Chr18:1516153 Cone8ag0281 Cone-Chr8:1625057 2.52E-212 dispersed
Cone11ag1276 Cone-Chr11:9480935 Cone18ag0309 Cone-Chr18:1516153 1.09E-272 wgd
Cone18ag0309 Cone-Chr18:1516153 Cone5ag1201 Cone-Chr5:5436270 2.23E-189 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82308 PF05910 DUF868 1.10E-76 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0309 K04371 - mdm:103421855 671.003