Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0311 ATGGGTTACTTTTGCTGGAGTGGAAAGTCAAGCAAGCAAACAGAGGATAACAAGAAAAGCTACAAGCCGGACGGTCAAGCCGGTTCAGAAACCTTGAATACTGTTTCAAAGTTGAATAACAATGTAAAGAAGGATTCAACTGTAAAGGAGGTAGTAGTCTCTAAGGATGATCAGTTAGCTTTAGACTTAAAGGGATTGGATTTGAAGCATGTCGTCCCTAATGACGGAAAAAAGCGGGCCCAGACATTTACATTCGATGAACTTGCAGCAGCTACTGGTAATTTCCGGTCAGATTGCTTTCTAGGAGAAGGTGGATTCGGCAAAGTTTACAAGGGCTACTTGGAAAAAATCAACCAGGTTGTGGCTATTAAGCAACTAGACCGAAATGGGCTTCAAGGGATAAGAGAATTTGTCGTAGAAGTCTTGACGCTAAGTGAAGCGGACCATCCGAATCTTGTAAAACTGATCGGCTTTTGTGCTGAGGGAGATCAAAGACTATTAGTCTATGAATACATGCCATTAGGTTCATTGGAAAACCATTTGCACGATCTTCAACCTGGGGCAAAAGTTCTTGATTGGAATACACGAATGAAAATAGCTGCAGGGGCAGCTAAGGGTTTGGAGTACTTACACGACAAAATGAACCCTCCAATCATATACCGAGACTTGAAATGTTCCAACATTTTGCTCGGGGAAGGGTACCATCCGAAACTCTCTGATTTCGGACTGGCTAAAGTGGGCCCCAGTGGGGACAATACCCATGTTTCTACCAGGGTTATGGGAACATATGGTTATTGTGCTCCAGACTATGCCATGACCGGTCAGTTAACTTTCAAATCGGATATATACAGCTTTGGGGTTGTTCTTTTGGAGGTAATCACAGGAAGGAAAGCAATTGATGTTACAAAATCTCAAAGGGAGCAGAACCTCGTAGCATGGGCTCGACCCTTGTTCAAAGATCGGAAGAAATTCTCGCAAATGGTCGACCCTATGCTACAAGGTCAATATCCGGTGAGAGGGTTATATCAAGCTCTTGCTATAGCTGCAATGTGTGTTCAAGAACAGCCTAATATGAGGCCTATTGTAGCTGATGTGGTTTCTGCTGTAAATTTTCTTGCTTCCCAAAAGTACGACCTGCAAACACATCCAGTTCAATGCTCTTCTAGGCAGGGCCTGCCTTCAGGTAGAGAGAGAGGGAACTATGATAGAAGACAAGTTGCAGATGATGGAGTCGAGTCGAATTAA 1245 43.53 MGYFCWSGKSSKQTEDNKKSYKPDGQAGSETLNTVSKLNNNVKKDSTVKEVVVSKDDQLALDLKGLDLKHVVPNDGKKRAQTFTFDELAAATGNFRSDCFLGEGGFGKVYKGYLEKINQVVAIKQLDRNGLQGIREFVVEVLTLSEADHPNLVKLIGFCAEGDQRLLVYEYMPLGSLENHLHDLQPGAKVLDWNTRMKIAAGAAKGLEYLHDKMNPPIIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDNTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLEVITGRKAIDVTKSQREQNLVAWARPLFKDRKKFSQMVDPMLQGQYPVRGLYQALAIAAMCVQEQPNMRPIVADVVSAVNFLASQKYDLQTHPVQCSSRQGLPSGRERGNYDRRQVADDGVESN 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1529245 1531945 + Conep18aG0031800.1 Cone18ag0311 457272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0311 414 Gene3D Transferase(Phosphotransferase) domain 1 172 388 - -
Cone18ag0311 414 PANTHER OS07G0668900 PROTEIN 31 389 - -
Cone18ag0311 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0311 414 MobiDBLite consensus disorder prediction 396 414 - -
Cone18ag0311 414 SMART serkin_6 95 372 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0311 414 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524(InterPro)
Cone18ag0311 414 SUPERFAMILY Protein kinase-like (PK-like) 81 385 IPR011009 -
Cone18ag0311 414 MobiDBLite consensus disorder prediction 384 414 - -
Cone18ag0311 414 Pfam Protein tyrosine and serine/threonine kinase 100 366 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0311 414 CDD STKc_IRAK 101 366 - -
Cone18ag0311 414 ProSiteProfiles Protein kinase domain profile. 95 372 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0311 414 MobiDBLite consensus disorder prediction 1 30 - -
Cone18ag0311 414 Gene3D Phosphorylase Kinase; domain 1 80 171 - -
Cone18ag0311 414 FunFam probable serine/threonine-protein kinase RLCKVII 69 171 - -
Cone18ag0311 414 FunFam Serine/threonine-protein kinase PBS1 172 387 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0311 Cone-Chr18:1529245 Cone1ag1332 Cone-Chr1:56450553 4.86E-178 dispersed
Cone1ag0688 Cone-Chr1:6432681 Cone18ag0311 Cone-Chr18:1529245 1.35E-67 wgd
Cone10ag0271 Cone-Chr10:1290438 Cone18ag0311 Cone-Chr18:1529245 7.98E-181 wgd
Cone11ag1273 Cone-Chr11:9465606 Cone18ag0311 Cone-Chr18:1529245 3.50E-287 wgd
Cone18ag0311 Cone-Chr18:1529245 Cone3ag0298 Cone-Chr3:1540435 1.56E-178 wgd
Cone18ag0311 Cone-Chr18:1529245 Cone5ag1197 Cone-Chr5:5414199 1.66E-198 wgd
Cone18ag0311 Cone-Chr18:1529245 Cone5ag0318 Cone-Chr5:1348653 1.55E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82309 PF00860 Xan_ur_permease 1.70E-68 CL0062 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0311 - - - 0.0