Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0342 ATGGCGAAAATCCTGATTTCATCTCTACCGTTCGTCGGCGCTCCACTTCCATCATCCCTCTCTCGTCATGGCGGCCTCCACAGCCTACCTCAACGTGGACTCGTCGCGACCAGAGTCAAGTTCAGTCTCCATGAGATTCCACCTGTCCATTCCTTCGATTACGTTGCCTTTGATTTTAACACGATTGCTAGCAGAGCTGAAGGCTTGCTTTATACGCTAGCCGATGCTGCGGTGGCTGTTGATCCGGCGGCTTCAGGCGACGCAGCTACTTCCACAGCTGATGCTGCCGTGCAGAAGAATGGTGGCTGGTTCGGATTTATCTCCGACGGAATGGAATTCGTTCTCAAGGTGTTGAAGGATGGACTTACAGCCGTGCACGTGCCTTATGCATATGGATTTGCAATTATACTGCTCACTGTTATTGTTAAAGTTGCCACTTTACCTCTTACCAAGCAGCAGGTTGAATCAACATTGGCAATGCAAAACATCCAACCTAAGATTAAAGCCATCCAACAAAGATATGCTGGGAATCAAGAAAGAATACAACTTGAGACATCACGGCTTTATAGGCAGGCTGGGGTGAATCCGCTAGCAGGTTGTTTACCTACTTTGGCCACTATACCAGTCTGGATAGGACTATACCAAGCTCTTTCAAACGTGGCAAATGAGGGATTGTTGACAGAAGGTTTCTTTTGGATACCATCCCTTGGTGGCCCAACTACAATTGCTGCTCGACAAAGTGGAGCAGGAATTTCATGGCTAATACCATTTGTGGATGGCCATCCACCATTGGGATGGCACGATACTGCAGCATACCTTGTTTTACCTGTCCTCCTTGTTGCTTCTCAGTATGTATCGATGGAAATTATGAAGCCACCCCAGACTGATGATCCAGCACAAAAGAATACCCTTCTTGTTTTCAAGTTTCTTCCACTCATGATCGGTTACTTCTCCTTATCTGTTCCGTCTGGATTATCCATTTATTGGTTCACAAATAATGTTCTTAGCACGGCCCAGCAAGTTTGGTTACGGAAAATGGGAGGCGCAAAGCCAGTTGTGGACGAGGATGCTAGTGGAATCATAACAGCAGGACGGGCAAAAAGAACAGCTTTAGAGTTAGGGCGGGATGGTGATAAGTTTAGACAGTTAAAAGAACAAGAGAGAAGTAAAAAATCAAGCAAGGCCGTGCTGGCTGAAGTGGTTGAGACTCTGGCTTTTGAATCTGACGACTCTGAAGATGGTTCGGAAGAAGAAGATATTAAGGAGAAGGGTGTAAAAGTGGAAGAGGTCTACGCTTCTAGTGCTGGCAAAAGCATCCCAGATTATAACAGACCGAAAAGAAGCAAACGTTCAAAGCGAAAGAGAGCTGTATGA 1374 46.22 MAKILISSLPFVGAPLPSSLSRHGGLHSLPQRGLVATRVKFSLHEIPPVHSFDYVAFDFNTIASRAEGLLYTLADAAVAVDPAASGDAATSTADAAVQKNGGWFGFISDGMEFVLKVLKDGLTAVHVPYAYGFAIILLTVIVKVATLPLTKQQVESTLAMQNIQPKIKAIQQRYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLGGPTTIAARQSGAGISWLIPFVDGHPPLGWHDTAAYLVLPVLLVASQYVSMEIMKPPQTDDPAQKNTLLVFKFLPLMIGYFSLSVPSGLSIYWFTNNVLSTAQQVWLRKMGGAKPVVDEDASGIITAGRAKRTALELGRDGDKFRQLKEQERSKKSSKAVLAEVVETLAFESDDSEDGSEEEDIKEKGVKVEEVYASSAGKSIPDYNRPKRSKRSKRKRAV 457
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 1681920 1684946 - Conep18aG0035000.1 Cone18ag0342 457303
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0342 457 MobiDBLite consensus disorder prediction 407 457 - -
Cone18ag0342 457 PANTHER OXA1 39 390 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(PANTHER)|GO:0032977(InterPro)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Cone18ag0342 457 NCBIfam membrane protein insertase YidC 131 344 IPR028055 -
Cone18ag0342 457 CDD 5TM_YidC_Alb3 132 345 IPR047196 -
Cone18ag0342 457 Pfam 60Kd inner membrane protein 131 345 IPR028055 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1100 Cone-Chr13:8887270 Cone18ag0342 Cone-Chr18:1681920 2.19E-140 dispersed
Cone18ag0342 Cone-Chr18:1681920 Cone19ag1088 Cone-Chr19:7916613 1.01E-132 dispersed
Cone11ag1248 Cone-Chr11:9323512 Cone18ag0342 Cone-Chr18:1681920 3.57E-299 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0342 K03217 - vvi:100260431 668.307