Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0355 ATGGCTGATCAGGTTCAACACCCCACAGTCTTTCAGAAGATGGCTGGAAGCCTTCACTGCCAATCCACTCTTTCATCTGATGTTCAGGGTGATTTTGGTTTCAAGAGACCTGCTTTCCACCAAAGACGCACCACCCTTGGGAACTACTCCAATGCTGCATTGGTACCATCATGCAGGGCCACTGTTGATCTATCTAGCGTTACGTCAACTGCGTCCCCAGTTTTTGTTGCAGCCCCTGCAGAGAAAGGACACTTTCTGATTGATTTCCTTATGGGTGGTGTCTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCAATTGAACGTGTCAAGCTTTTGATTCAAAATCAGGATGAGATGATTAAAACTGGCAGGCTTGCTGAACCCTACAAGGGCATTGGTGATTGTTTCGGCCGAACTATCAAGGAAGAGGGTTTTGGTTCATTGTGGAGGGGTAACACTGCCAATGTCATCCGTTACTTCCCAACTCAAGCCTTGAACTTTGCTTTCAAGGACTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAAGGATGGTTACTGGAAATGGTTTGCAGGAAACCTTGCATCTGGTGGTGCTGCTGGTGCTTCATCACTCCTCTTTGTCTATTCTCTTGACTATGCTCGTACCCGTTTGGCCAATGATGCAAAGGCTGCAAAGAAGGGAGGAGAGAGGCAATTCAATGGTTTGGTGGATGTCTACAGGAAGACATTGGCATCTGATGGAATTGCTGGGCTTTACCGTGGGTTCAACATTTCATGTGTCGGCATCATTGTCTATCGTGGTCTTTACTTTGGAATGTACGACTCTCTGAAGCCAGTCCTCTTGACTGGATCATTGCAGGATAGCTTCTTTGCTAGTTTTGCACTAGGTTGGCTCATCACCAATGGTGCAGGGCTTGCTTCCTACCCCATTGACACAGTCCGTAGAAGAATGATGATGACTTCTGGAGAGGCAGTCAAGTACAAGAGCTCTTTGGATGCATTCAACCAGATTATGAAGAACGAGGGAGCCAAGTCTCTCTTCAAGGGTGCTGGTGCTAACATCCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCCGGTTACGATAAGTTGCAGGTCATTGTGTTCGGAAAGAAGTACGGATCTGGTGGTGCTTAA 1158 47.67 MADQVQHPTVFQKMAGSLHCQSTLSSDVQGDFGFKRPAFHQRRTTLGNYSNAALVPSCRATVDLSSVTSTASPVFVAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLAEPYKGIGDCFGRTIKEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFNQIMKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1720121 1723141 + Conep18aG0036300.1 Cone18ag0355 457316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0355 385 Pfam Mitochondrial carrier protein 288 376 IPR018108 -
Cone18ag0355 385 Pfam Mitochondrial carrier protein 188 282 IPR018108 -
Cone18ag0355 385 Pfam Mitochondrial carrier protein 84 180 IPR018108 -
Cone18ag0355 385 PRINTS Adenine nucleotide translocator signature 293 309 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone18ag0355 385 PRINTS Adenine nucleotide translocator signature 162 174 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone18ag0355 385 PRINTS Adenine nucleotide translocator signature 85 97 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone18ag0355 385 PRINTS Adenine nucleotide translocator signature 129 150 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone18ag0355 385 PRINTS Adenine nucleotide translocator signature 188 201 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone18ag0355 385 Gene3D Mitochondrial carrier domain 86 381 IPR023395 -
Cone18ag0355 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 288 374 IPR018108 -
Cone18ag0355 385 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 81 382 IPR002113 GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cone18ag0355 385 SUPERFAMILY Mitochondrial carrier 84 370 IPR023395 -
Cone18ag0355 385 PRINTS Mitochondrial carrier protein signature 151 171 IPR002067 GO:0055085(InterPro)
Cone18ag0355 385 PRINTS Mitochondrial carrier protein signature 253 271 IPR002067 GO:0055085(InterPro)
Cone18ag0355 385 PRINTS Mitochondrial carrier protein signature 297 319 IPR002067 GO:0055085(InterPro)
Cone18ag0355 385 PRINTS Mitochondrial carrier protein signature 88 101 IPR002067 GO:0055085(InterPro)
Cone18ag0355 385 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085(InterPro)
Cone18ag0355 385 PRINTS Mitochondrial carrier protein signature 101 115 IPR002067 GO:0055085(InterPro)
Cone18ag0355 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 188 280 IPR018108 -
Cone18ag0355 385 FunFam ADP,ATP carrier protein, mitochondrial 86 381 - -
Cone18ag0355 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 83 176 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0225 Cone-Chr16:1653918 Cone18ag0355 Cone-Chr18:1720121 2.70E-134 dispersed
Cone17ag0930 Cone-Chr17:7283885 Cone18ag0355 Cone-Chr18:1720121 4.49E-66 dispersed
Cone18ag0355 Cone-Chr18:1720121 Cone8ag1517 Cone-Chr8:11444879 8.31E-210 dispersed
Cone11ag1238 Cone-Chr11:9278307 Cone18ag0355 Cone-Chr18:1720121 2.36E-273 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0355 K05863 - csv:101203733 656.366