Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone18ag0381 | ATGATCAATCCTAGCAACCTCACCTCCTCCGGCCATAATCTCTTCATACTTTCCGGCCACAATCCCTTCCTCTTCCTCTTATCATTCATCCACATCCTAGAACTTCTCATCGCCCTTGTTGTCTTCTTAGCCATCCACTCTCTAAGACAGAAGAGAAACCAAGGGCTACCCTCATGGCCTATTGTTGGAATGTTACCGTCTCTAATCTCCGGACTTCAAACCAATGTGTATGAATGGATGACTGATGTCACCTCTTGTCAAAACGGGACGTTTTTCTTCAATGGACCTTGGTTCTCTAGCCTCAATTGTGTCATTACTTCGGACCCACGTAACCTTGAACATGTTCTGAAAACCAAATTCTCAATTTACCCCAAAGGCCTTTATTTTCGGAACACAGTTCGAGATCTCTTAGGTGACGGGATTTTCAGTGCCGATGATGAAACTTGGCAAAGACAGAGAAAAACAGCTAGCATTGAGTTCCACTCCGCGAAATTTAGACAGTTGACTGTCGATTCATTGTTTAAACTTGTCCATTCCCGCCTCATACCGGTTCTGAACGATTCGATCATACAGTCCTGTCCCATTGACCTACAAGATGTGCTATTAAGGTTGACGTTTGATAATGTTTGTATGATTGCTTTCGGGGTCGACCCTGGTTGTTTGAGCCAGGGATCTCAGAAAATATCCTTCGCCAAAGCGTTTGAAGATGCAACGGAAATCACAGTGCTAAGGTTCATGACACCAATGTGTGTGTGGAGGATTATGAGGTTTTTTGACTTAGGGGCGGAGAAGAAACTGAAGGAGTTGATAAAAGCGGTCGATCAATTTGCAGAGAATGTGATTCAGAAGAGGAAAGAGGAGTTGTTGAGGATGGATAAAGAGGAGGAGGAGAAGAATAAGAAGAGGTCAGATCTTTTGACAGTGTTCATGAGGTTGAAGGATGAGAATGGGGAGTGTTTTTCAGACAAGTTTTTGAGGGATATTTGTGTAAATTTCATACTTGCGGGGAGGGATACTTCTTCAGTGGCATTGAGCTGGTTTTTCTGGTTGGTTGGTAAGAATCCAGAGGTGGAAGAGAAGATTTTAAGTGAGATTTGTGGGATTATTAAGGAGAAGTATAAGAAGGGTGAGTTGGAACATCCTCTAGTTTTTAAGGCAGAAGAGATTAAGAAGATGGATTATTTGCACGCTGCTTTGTCTGAGGCTTTGAGGTTGTACCCTTCTGTTCCTCTTGATCATAAAGAGGTTATTGAAGATGATGTACTTCCGGACGGGAAAGTACTAAAGAAAGGAACATTTGTGGTATACTCGATCTATTCGATGGGAAGAGCGGAGGCCATCTGGGGAAAAGATTGCCGTGAATTCAAGCCAGAGAGATGGCTAAGAGACGGCCGGTTCATGAGCGAATCAGCCTATAAATTCCCCGTGTTTAATGGTGGGCCCCGCTTGTGCTTAGGCAAGGATTTTGCGTACTACCAAATGAAATACACTGCTGCCTCTATTATCTACCATTATCATGTCAAAGTGGTGGAAGGTCATCCCGTGGTTCCAAAGCTTGCATTGACCATGTACATGAAGCATGGTTTGAAGGTGAATATATCGCGCAGGGATGAATCAGAAATTCGAAAGTATTTTGAAATAAGTTATTAG | 1650 | 43.09 | MINPSNLTSSGHNLFILSGHNPFLFLLSFIHILELLIALVVFLAIHSLRQKRNQGLPSWPIVGMLPSLISGLQTNVYEWMTDVTSCQNGTFFFNGPWFSSLNCVITSDPRNLEHVLKTKFSIYPKGLYFRNTVRDLLGDGIFSADDETWQRQRKTASIEFHSAKFRQLTVDSLFKLVHSRLIPVLNDSIIQSCPIDLQDVLLRLTFDNVCMIAFGVDPGCLSQGSQKISFAKAFEDATEITVLRFMTPMCVWRIMRFFDLGAEKKLKELIKAVDQFAENVIQKRKEELLRMDKEEEEKNKKRSDLLTVFMRLKDENGECFSDKFLRDICVNFILAGRDTSSVALSWFFWLVGKNPEVEEKILSEICGIIKEKYKKGELEHPLVFKAEEIKKMDYLHAALSEALRLYPSVPLDHKEVIEDDVLPDGKVLKKGTFVVYSIYSMGRAEAIWGKDCREFKPERWLRDGRFMSESAYKFPVFNGGPRLCLGKDFAYYQMKYTAASIIYHYHVKVVEGHPVVPKLALTMYMKHGLKVNISRRDESEIRKYFEISY | 549 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 1846351 | 1848166 | + | Conep18aG0039000.1 | Cone18ag0381 | 457342 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone18ag0381 | 549 | PRINTS | E-class P450 group I signature | 396 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0381 | 549 | PRINTS | E-class P450 group I signature | 474 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0381 | 549 | PRINTS | E-class P450 group I signature | 324 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0381 | 549 | PRINTS | E-class P450 group I signature | 344 | 370 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0381 | 549 | PRINTS | E-class P450 group I signature | 484 | 507 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0381 | 549 | FunFam | Cytochrome P450 | 47 | 539 | - | - | |
| Cone18ag0381 | 549 | SUPERFAMILY | Cytochrome P450 | 55 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0381 | 549 | CDD | CYP86A | 91 | 529 | - | - | |
| Cone18ag0381 | 549 | PRINTS | P450 superfamily signature | 335 | 352 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0381 | 549 | PRINTS | P450 superfamily signature | 475 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0381 | 549 | PRINTS | P450 superfamily signature | 484 | 495 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0381 | 549 | PRINTS | P450 superfamily signature | 397 | 408 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0381 | 549 | PANTHER | CYTOCHROME P450 | 41 | 529 | - | - | |
| Cone18ag0381 | 549 | Coils | Coil | 266 | 304 | - | - | |
| Cone18ag0381 | 549 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 477 | 486 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone18ag0381 | 549 | Pfam | Cytochrome P450 | 55 | 522 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0381 | 549 | Gene3D | Cytochrome P450 | 42 | 546 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone16ag0367 | Cone-Chr16:6047826 | Cone18ag0381 | Cone-Chr18:1846351 | 2.36E-158 | dispersed | |
| Cone18ag0381 | Cone-Chr18:1846351 | Cone2ag0628 | Cone-Chr2:4018481 | 4.66E-153 | dispersed | |
| Cone11ag1211 | Cone-Chr11:9121646 | Cone18ag0381 | Cone-Chr18:1846351 | 0 | wgd | |
| Cone18ag0381 | Cone-Chr18:1846351 | Cone20ag1046 | Cone-Chr20:7299271 | 3.08E-201 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone18ag0381 | K15402 | - | cit:102607755 | 794.653 |