Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0386 ATGAGGGGAGGGCATGAGCCGCGTGCAAACTCGTCTTGCTCAGCTTGCAAGCTGTTGAAGAGACGGTGCAGCCCAACGTGTATATTTGCTCCATATTTCCGGTCGGATGATGATCCGGGCAGATTCGCCAAAGTGCATAAGGTGTTTGGGGCGAGCAACGTGAGCAAGATCTTAACCGAAGTGCCGGAAGATCAAAGGGAGGATACAGCCAATTCTTTGGTGTACGAGGCCGAGGCACGGCTTAAGGACCCAGTTTATGGTTGCATTGGAGCCATAGCTTTCCTCCAGGGGAAAATGGTCGAGCTTCAGAATGATCTCGAAATCGCTAGGTCCCGCCTCGCAGTCTATGCAGCTAATTCTTCTTCTTCTTCTCCATATGGTGAGGCGGTCGTGCCTTTTTCCCATCTTCCTGGCTGTACTACTGGATTGAATGAGAATGTTGTTTGTCAGAATTCATCAGAGCTAAATCAACAGGAGCATATGAATTGTTTTGGAAATTTTCCTTCTATATAG 513 48.34 MRGGHEPRANSSCSACKLLKRRCSPTCIFAPYFRSDDDPGRFAKVHKVFGASNVSKILTEVPEDQREDTANSLVYEAEARLKDPVYGCIGAIAFLQGKMVELQNDLEIARSRLAVYAANSSSSSPYGEAVVPFSHLPGCTTGLNENVVCQNSSELNQQEHMNCFGNFPSI 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1870220 1870732 + Conep18aG0039500.1 Cone18ag0386 457347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0386 170 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 129 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Cone18ag0386 170 Coils Coil 92 119 - -
Cone18ag0386 170 Pfam Lateral organ boundaries (LOB) domain 12 109 IPR004883 -
Cone18ag0386 170 ProSiteProfiles LOB domain profile. 11 113 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0386 Cone-Chr18:1870220 Cone9ag1307 Cone-Chr9:9810044 5.46E-41 dispersed
Cone11ag1202 Cone-Chr11:9095715 Cone18ag0386 Cone-Chr18:1870220 4.21E-97 wgd
Cone18ag0386 Cone-Chr18:1870220 Cone5ag0152 Cone-Chr5:647674 4.51E-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45154 PF19036 Fuz_longin_1 6.20E-25 CL0431 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0386 - - - 0.0