Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0394 ATGAAGAAACCACCTTCACCGGCGGCAACCATCGTCGCCGCCGCTATTATCATTACGTTTACCTTACATCTCCTCCCTCGTAACCATGCTCTCGGTGGCAGCTCCTCCTTCACTATGGCCGTCATCTACGGAGCCTCCTCCACCGTCTGCGGCATCGTCGCCGGGCAACCAACTCAGCGCATCGCCTGCTACTTCAACGGCCAAACACTCCTCCTCGAACCCAACGCATCCTTCTCATCCATTTCCGGCGGCCGCAACTTTTTCTGCGGCATAAGATCAGGCGGGTACAGCCTCCTCTGCTGGACCAACCTTTTTCCCTACTCCGGCTTCGACATCAAACGACTCTACTTCGACAACACTGTTCTATTGGAAAATCTCTCGATTGGCGACGATCAAATTTGTGCCACAACAGTCGGAGCCGGAAATTTATATTGCTGGAGAGGAGACGATAGAGGTAAGTTCGATTTACCTTCGGGTCAATTTCTGTCAATTTCATCTGGTTTTGGTTTTTCTTGCGGAATTTTGAAGAACAATGGCTCTGTTCGCTGTTGGGGTAGTAATAAGTTAATAGCTAATCAGATTGAAGATGAGTTTAGGAATATATCAATGTTAGGCATTGAAGCAGGTGGGTCCCATGTTTGTGGATTGAACTCTACTGGCTTTCTGATTTGTAAAGGAAACAATGATTCTGGCCAGTTAAATGTTCCTTCAAATTTACTAACCATGGAGTTTTCCGAATTTTCTCTTGGATCGAATCATACATGTGCGATTAGGCAAAACAATGGATCTGTGATTTGTTGGGGAGGTAAAGGGCTATTTTCAGTAAATTCAACACGAGGAATTTCATTTGAAACTATCGTTTCCGGGACAGATTTTACTTGCGGATTGACTACGAGAAATTTCTCAGTTATGTGTTGGGGGCCTGGTTGGCTTAATGGATCTGATATTAGCTCGGTTCTTCAACTTCCCGGAATTATTCCCGGGCCTTGTATTCAATCTTCTTGTAGTGAATGTGGTCTATATTCTGGTTCTCTTTCTCTATGCGATGATTCTCAGGTTATCTGCAAGCGATGTTTGACTCAAATCCCATCCCGGGCCCCCCCTCCATTACTGCCAGTTTTCCTCAAACCATCTTCTCCATCTAGAGGCTTGACTTGGGGTTTAATAGCATTTGCCATTGTAGGTTCGGTTGGAATGTTTGCCGGCATTTGCACACTGATCTACTGCTTATGGACCGGAGTTTGCTTTGGCCATAAAAAAAAGGTACATAACACAGTCCAACCCACAATCACTAGAGGCCCAAGCTCTAGTTCCGGAACATCTAACACGAGAAGCAGTGGCCCACCTTCTAGAACAATGACAATTCGGAGGCAAGGCTCGAGGCTTATCAGGAGGCAGAGGAGCGGGCCTTCATCAAAACACGATGAAAAAGCAGAGGAATTCTCTTTTTCTGAGCTTTCAATAGCTACCAATAGTTTCTCACTAGAGAACAAGATTGGTTCCGGAAGTTTTGGCATTGTTTATAAAGGTAAGTTATGTGATGGTAGGGAAGTCGCTATTAAGAGGGGAGAAACAGGTATTAAGACGAAGAAGTTTCAAGAGAAAGAAACAGCGTTTGATTCGGAAGTAGCCATTTTATCCCGCCTTAACCATAAACACATAGTTAGGCTCGTGGGTTATTGTGAAGAGAAAGAGGAAAGGCTTTTAGTTTATGAGTACATGAAAAATGGTGCGCTTTATGATCATTTACATGACAAGAGGAATGTTCAAGAGAGTAGTAGTATTATAAATTCTTGGAAGATGAGGATCAATATAGCATTAGATGCGACTCGAGGAATTGAATACCTACATCGTTATGCGGACCCACCTATAATTCATAGGGACATCAAGTCTTCTAACATCCTTCTTGATTCTAATTGGACGGCTAGAGTGTCCGATTTAGGATTGTCTATGATGAGTCCTCAATCAGATGGTGATTATCGGCTGACGAAAGCGGCTGGAACCGTTGGATATATCGATCCGGAGTACTATGGTCTGAATCTGTTGACTTCAAAGAGTGATGTTTATGGGCTTGGAGTGGTTCTGTTAGAGCTTTTGACCGGAAAAAGAGCAATTTTTAAAAATGGGGAGAGTGGAGAGACGCCTGTAAGTGTGGTCGACTTTGCTGTGCCGGAAATTGTGGCTGGAAAATTGAGTAACGTTTTGGATAGAAGGGTGGGCCCACCTAGGATGAATGAAAGTGATGCGGTGGAGCAAGTGGCTTATATCACGTTGCAATGTGTTAATTTGGAGGGGAAGGAGAGGCCGACGATTACTGATGTTATCGCTTGTTTAGAACGGGCTTTGGCCCTTTGTGCTGAAAGTCATGGAAGCATTTCGACTGGTAGGAATGCTGTTGTTTCCGAGTAG 2409 44.46 MKKPPSPAATIVAAAIIITFTLHLLPRNHALGGSSSFTMAVIYGASSTVCGIVAGQPTQRIACYFNGQTLLLEPNASFSSISGGRNFFCGIRSGGYSLLCWTNLFPYSGFDIKRLYFDNTVLLENLSIGDDQICATTVGAGNLYCWRGDDRGKFDLPSGQFLSISSGFGFSCGILKNNGSVRCWGSNKLIANQIEDEFRNISMLGIEAGGSHVCGLNSTGFLICKGNNDSGQLNVPSNLLTMEFSEFSLGSNHTCAIRQNNGSVICWGGKGLFSVNSTRGISFETIVSGTDFTCGLTTRNFSVMCWGPGWLNGSDISSVLQLPGIIPGPCIQSSCSECGLYSGSLSLCDDSQVICKRCLTQIPSRAPPPLLPVFLKPSSPSRGLTWGLIAFAIVGSVGMFAGICTLIYCLWTGVCFGHKKKVHNTVQPTITRGPSSSSGTSNTRSSGPPSRTMTIRRQGSRLIRRQRSGPSSKHDEKAEEFSFSELSIATNSFSLENKIGSGSFGIVYKGKLCDGREVAIKRGETGIKTKKFQEKETAFDSEVAILSRLNHKHIVRLVGYCEEKEERLLVYEYMKNGALYDHLHDKRNVQESSSIINSWKMRINIALDATRGIEYLHRYADPPIIHRDIKSSNILLDSNWTARVSDLGLSMMSPQSDGDYRLTKAAGTVGYIDPEYYGLNLLTSKSDVYGLGVVLLELLTGKRAIFKNGESGETPVSVVDFAVPEIVAGKLSNVLDRRVGPPRMNESDAVEQVAYITLQCVNLEGKERPTITDVIACLERALALCAESHGSISTGRNAVVSE 802
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1936130 1938819 + Conep18aG0040300.1 Cone18ag0394 457355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0394 802 Pfam Protein kinase domain 494 775 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0394 802 Gene3D - 73 355 IPR009091 -
Cone18ag0394 802 SUPERFAMILY RCC1/BLIP-II 69 269 IPR009091 -
Cone18ag0394 802 FunFam serine/threonine-protein kinase-like protein CCR1 463 573 - -
Cone18ag0394 802 MobiDBLite consensus disorder prediction 427 478 - -
Cone18ag0394 802 Gene3D Phosphorylase Kinase; domain 1 455 573 - -
Cone18ag0394 802 ProSiteProfiles Protein kinase domain profile. 493 782 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0394 802 SUPERFAMILY Protein kinase-like (PK-like) 475 778 IPR011009 -
Cone18ag0394 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0394 802 Gene3D Transferase(Phosphotransferase) domain 1 574 792 - -
Cone18ag0394 802 MobiDBLite consensus disorder prediction 427 457 - -
Cone18ag0394 802 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 38 792 IPR044815 GO:0004674(InterPro)
Cone18ag0394 802 SMART serkin_6 493 778 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0394 802 Pfam Regulator of chromosome condensation (RCC1) repeat 163 187 - -
Cone18ag0394 802 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0394 Cone-Chr18:1936130 Cone1ag1213 Cone-Chr1:55958536 0 dispersed
Cone19ag1255 Cone-Chr19:8608207 Cone18ag0394 Cone-Chr18:1936130 1.89E-52 dispersed
Cone18ag0394 Cone-Chr18:1936130 Cone5ag0200 Cone-Chr5:832971 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82313 PF01301 Glyco_hydro_35 6.90E-105 CL0058 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0394 - - - 0.0