Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0421 ATGGCAAAGATCAGAGATAGAACTGAAGATTTCAAGGATGTTGTGAGGCATACTGCCCAATCTTTAGGATATAATGAGTTCAAGTTAGCAGCAATTATGGCCTCTTTCATAATTCAGAAACCCCGTCAAAGGTCTCCTTTTATCAAAGCTGCATTAAAGACACTAGAAAGTATTGGAGCTCTTGAACAGTTTATGTTGAAACATCGGAAAGACTATGTAGATATGCGCCGTACCACAGAGCAGGAGAGAGACATCATTGAAACTGAAGTGAGTGCTTTCATCAAAGCATGCCAAGAACAAATTGATATTCTTAAAAACAGTATAAATGATGAAGAAGTGCACTCTAAGGGCTGGCTTGGTATGTCAGCTAATGGTGCTAATGCTGATACCATAGCACACAAACATGGTGTGGTACTGATTTTGAGTGAGAAGCTCCACTCGGTTACATCCCAATTTGATCAGCTAAGAGCTATTCGCTTCCAAGATGTCATTAACAAAGCAACTCCTAGAAGAAAACCTACACGGGTTATAAGTGCAAATTCTGAAGATACCTCTAGATCGAAAAATTCAAATTTGAGAGAGCCTGAGGATTTTCAACCTGAGCCTCTAAGAGTCCAACAACAACTGTTGGATGATGAAACACGTGCACTTCAGGCAGAGTTGAGTAGTCTTCTTGATGTAGCTCAAGAAACCGAGAGGAAGATGGTGGAAATGTCTGCTCTAAATCACCTCATGTCAACCCACGTTTTGCAACAAGCTCAACAAATAGAATTTCTTTATGAACAGGCAGTAGAAGCCACGAAGAACGTCGAGCTTGGTAACAAGGAACTATCGCAAGCCATTGACCGGAATAGCAGCAGCCGAACATTTCTTTTGCTTTTTCTGTTTGTCCTTACTTTTTCAGTCCTTTTTCTTGATTGGTATAGTTGA 930 40.43 MAKIRDRTEDFKDVVRHTAQSLGYNEFKLAAIMASFIIQKPRQRSPFIKAALKTLESIGALEQFMLKHRKDYVDMRRTTEQERDIIETEVSAFIKACQEQIDILKNSINDEEVHSKGWLGMSANGANADTIAHKHGVVLILSEKLHSVTSQFDQLRAIRFQDVINKATPRRKPTRVISANSEDTSRSKNSNLREPEDFQPEPLRVQQQLLDDETRALQAELSSLLDVAQETERKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIDRNSSSRTFLLLFLFVLTFSVLFLDWYS 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2044321 2046834 - Conep18aG0043000.1 Cone18ag0421 457382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0421 309 PANTHER SYNTAXIN-18 1 309 - GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER)
Cone18ag0421 309 MobiDBLite consensus disorder prediction 169 202 - -
Cone18ag0421 309 SUPERFAMILY t-snare proteins 57 273 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Cone18ag0421 309 Coils Coil 94 114 - -
Cone18ag0421 309 FunFam Syntaxin-81 like 212 306 - -
Cone18ag0421 309 Gene3D - 211 306 - -
Cone18ag0421 309 Coils Coil 214 234 - -
Cone18ag0421 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 5 86 IPR019529 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1168 Cone-Chr11:8925283 Cone18ag0421 Cone-Chr18:2044321 4.80E-200 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0421 K08492 - mdm:103423429 482.641