Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0432 ATGGAATCGACGACGACGACTATCAAGCTCCTCCTCCTGAAGGCCGTGCTGCTATCATGCGCCATGAGCGTAGCCTCCGTCCAACGCTGTCCAAACTGCGGATCAAACGCAGTTCCCTATCCTCTAAGCACCAGCACAACATGCGGCGACCAATCGTACAAAATCCGGTGCGACGCAGGCTCGCTGAAATTCGATACGCTCAACAACACCTACTCGATCACTTCCATCAACCCCTCGATCCAGCGGCTCGTGATCCAGCCAGCCGGCTTCGTATCCAACACCTGCGTCACGTCCGATATTATCCACGAGGGAGTACAGCTCAACAGCAGCCTCCCCTTTAACGTCACCAGCAGCAACATGATCCTGTACCTTAACTGTACGGACACGCTGTTACGGTCGCCGTTGAATTGCTCTTCAACTAGTTTGTGTCACACTTATATCAACCATACAAGTGCCGCGTCTCCATGTATGGCTGCGCCTATATGCTGTACTTTCCGAGCGGGTGGGTCGTCGACGTCGTATATGATCCGGGTTCGGGATTCGGGCTGTAGTGCTTTCACGAGCTTTGTGAACTTGGACCCGAGTATACCGGTAAGTGACTGGGCCCAGCCCGGGTTGGAGATACAGTGGATTCAGCCATTGGAACCGGTGTGTGGGACCCAGGCCGACTGTGATGATAACTCTACGTGTGGGGCCGATCCAACTGAGGCGGGGTTGAGGAGGTGTTTTTGTCAATCCGGGCTTGTGTGGGATCCTGTTACAGGGGTGTGCTCGCGAAATGTCACGTGTCTAGATCCTAATGGCTGCGATGGCTCAAAAGCAACTGCATTAATAGCAGGTTTAACTTCCGGCCTCGGTGCAGCGGTTGTATTGTTGATCATTGTCATTCTATTATACAAACGGAAAAGACGAATCAAAGAAGCTCAAGACCTACTTACAAAAGAGCGGGAAGCAATCCTAAATGTTGGAGGTGGGGCAAGGGCCGCTAAGATCTTCTCTGGCAAGCAGATTAAGAAAGCGACGTGTAACTTCTCCTCAGACCGCCTCTTGGGGGCCGGTGGTTATGGTGAAGTCTACAAAGGTGTTCTTCAAGATGGAACCGTTGTAGCCGTCAAATGTGCTAAACTCGGCAACACTAAAGGAACCGATCAAGTCCTAAATGAAGTTCGAATTCTCTGCCAGGTTAATCACCGCAGCCTCGTCCGCTTGCTCGGTTGTTGTGTTGAGTTAGAACAGCCTATTTTGGTCTATGAATACATTCCGAACGGTAATTTGCTCGAATATTTACAAGGCAAAAGAGCCGGAGGTCGTGGGACCCTCTCTTGGATTTGTCGTCTACGAATCGCCCATGACACTGCTGAGGGTTTAGCCTACCTCCACTCATCCGCAGTTCCACCGATTTATCACCGGGATGTCAAGTCTAGTAACATTTTGTTAGACGAGAAGTTGAATGGGAAGGTTGCGGATTTCGGGTTATCTAGATTGGCTCACACAGATTTGAGCCATATCTCAACTTGTGCACAAGGGACTCTCGGATATCTTGATCCGGAGTATTATCGGAATTATCAGTTGACTGATAAGAGCGACGTTTATAGTTTTGGAGTGGTTTTATTGGAATTGTTGACATCTCAGAAGGCGATAGATTTCAACAGGGAATCAGATGATGTGAACTTGGCTGTTTATGTGAAGAGAATGGTTGAGGAAGAGAGATATCTGGATGCTGTCGATCAGGTGGTCAAGGAAGGGGCGAGTGATTTGGAAGTGGATACAATTAAGGCGCTGGGGTTTCTGGCAGTGGCGTGTCTAGAGGAACGGAGACAGAACCGTCCGTCCATGAAAGAAATTATGGAAGAGATTGATTACATTATTAGTGTTGCTACTGCTAATGTTACAAAGTAG 1899 49.18 MESTTTTIKLLLLKAVLLSCAMSVASVQRCPNCGSNAVPYPLSTSTTCGDQSYKIRCDAGSLKFDTLNNTYSITSINPSIQRLVIQPAGFVSNTCVTSDIIHEGVQLNSSLPFNVTSSNMILYLNCTDTLLRSPLNCSSTSLCHTYINHTSAASPCMAAPICCTFRAGGSSTSYMIRVRDSGCSAFTSFVNLDPSIPVSDWAQPGLEIQWIQPLEPVCGTQADCDDNSTCGADPTEAGLRRCFCQSGLVWDPVTGVCSRNVTCLDPNGCDGSKATALIAGLTSGLGAAVVLLIIVILLYKRKRRIKEAQDLLTKEREAILNVGGGARAAKIFSGKQIKKATCNFSSDRLLGAGGYGEVYKGVLQDGTVVAVKCAKLGNTKGTDQVLNEVRILCQVNHRSLVRLLGCCVELEQPILVYEYIPNGNLLEYLQGKRAGGRGTLSWICRLRIAHDTAEGLAYLHSSAVPPIYHRDVKSSNILLDEKLNGKVADFGLSRLAHTDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFNRESDDVNLAVYVKRMVEEERYLDAVDQVVKEGASDLEVDTIKALGFLAVACLEERRQNRPSMKEIMEEIDYIISVATANVTK 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2104882 2107094 - Conep18aG0044100.1 Cone18ag0432 457393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0432 632 FunFam Wall-associated receptor kinase-like 20 306 419 - -
Cone18ag0432 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0432 632 CDD STKc_IRAK 350 620 - -
Cone18ag0432 632 SMART serkin_6 344 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0432 632 ProSiteProfiles Protein kinase domain profile. 344 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0432 632 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524(InterPro)
Cone18ag0432 632 Pfam Protein tyrosine and serine/threonine kinase 347 619 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0432 632 Gene3D Transferase(Phosphotransferase) domain 1 420 631 - -
Cone18ag0432 632 SUPERFAMILY Protein kinase-like (PK-like) 330 622 IPR011009 -
Cone18ag0432 632 Gene3D Phosphorylase Kinase; domain 1 318 419 - -
Cone18ag0432 632 FunFam Wall-associated receptor kinase-like 20 420 632 - -
Cone18ag0432 632 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 30 622 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0801 Cone-Chr10:4068084 Cone18ag0432 Cone-Chr18:2104882 2.28E-45 dispersed
Cone18ag0432 Cone-Chr18:2104882 Cone4ag1440 Cone-Chr4:11435233 1.14E-85 dispersed
Cone11ag1152 Cone-Chr11:8836063 Cone18ag0432 Cone-Chr18:2104882 0 wgd
Cone18ag0432 Cone-Chr18:2104882 Cone3ag0219 Cone-Chr3:1159146 6.92E-38 wgd
Cone18ag0432 Cone-Chr18:2104882 Cone3ag0366 Cone-Chr3:1855957 2.98E-229 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82314 PF00704 Glyco_hydro_18 5.00E-18 CL0058 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0432 - - - 0.0