Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0437 ATGTCTACTACTCAATGGTGGCCTGCAGGTTATAATGTAGCCATGAGATCTCTAGATCCCATCTCCTCCGCCTCCTCATCTGATCCCTCCCTTCAACTCAAAATCACAGATCAAGAAGACGACAGATCACAAATCACAGACGGGCTTGGTCCCGGAAGAGAGCAAATTTTCTTTGAAAACAAAGAAACTAATGGACATGACAATATTGATATTAATGTTCAAGCATTATTAGCTTATGATCATATTCACGAAGATCTCGATTCTGGCAGCCAATTAGAAACCGTTCACGAACCTCCAGCTGGTAATTACATGATTCATCGGCATAAAAGAGGCCGCCCTCCGGGGTCAAAAAACAAGCCGAAACCACTTCCGATCGTTCTCACGGAAGAGATCAGTGGGCCTGACACTCTCCGGAGCTTCATCTTCGAGATCGATAACGGCGACGACATTATGGCGTGCATAGATACCTTTGCAAAGCGAAGACATAGGGGAGTCACGATTCTAAGTGGAAGTGGAACTGTTACTAATGTTACTCTCAAGCAGCAATTATTAGGTGACCGAGAAAATCAAGTTTTGAATCTTGAAGGAAGTTTTGAGATATTGTCTCTTTCTGGGGCGTTTTTGCCCGCCCCTTCGCCACCTGGAGCTTCTTGGCTGACCGTGTATCTGGCCGGAGGGGAAGGGGGTCGAGTTCTAGGAGGTTGTGTTGCAGGCCCGCTTGTGGCGGCTGGACGAGTGGTTGTAGTTGCCGCGACGTTTATGAATGTGATGTATGAGAAATTGCCGATTATGGACGGTTCGGAGAGTGTCTATTCTAATAATTTGACTAACCAATTGATGGAAAATGGTGATAAGATACAGCATGATAATTTGTATCAGGGCCTTCCTCGACCATGA 897 45.82 MSTTQWWPAGYNVAMRSLDPISSASSSDPSLQLKITDQEDDRSQITDGLGPGREQIFFENKETNGHDNIDINVQALLAYDHIHEDLDSGSQLETVHEPPAGNYMIHRHKRGRPPGSKNKPKPLPIVLTEEISGPDTLRSFIFEIDNGDDIMACIDTFAKRRHRGVTILSGSGTVTNVTLKQQLLGDRENQVLNLEGSFEILSLSGAFLPAPSPPGASWLTVYLAGGEGGRVLGGCVAGPLVAAGRVVVVAATFMNVMYEKLPIMDGSESVYSNNLTNQLMENGDKIQHDNLYQGLPRP 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2129411 2130307 + Conep18aG0044600.1 Cone18ag0437 457398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0437 298 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 254 IPR005175 -
Cone18ag0437 298 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 100 268 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cone18ag0437 298 CDD DUF296 138 224 IPR005175 -
Cone18ag0437 298 Gene3D - 137 267 - -
Cone18ag0437 298 MobiDBLite consensus disorder prediction 103 122 - -
Cone18ag0437 298 ProSiteProfiles PPC domain profile profile. 134 276 IPR005175 -
Cone18ag0437 298 SUPERFAMILY AF0104/ALDC/Ptd012-like 135 262 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0437 Cone-Chr18:2129411 Cone3ag0681 Cone-Chr3:3469813 6.76E-54 dispersed
Cone1ag1260 Cone-Chr1:56147160 Cone18ag0437 Cone-Chr18:2129411 2.98E-52 wgd
Cone11ag1145 Cone-Chr11:8815268 Cone18ag0437 Cone-Chr18:2129411 2.99E-146 wgd
Cone18ag0437 Cone-Chr18:2129411 Cone5ag0246 Cone-Chr5:1041605 8.86E-54 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0437 - - - 0.0