Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0450 ATGGGGAAGAATGAGTTTCTTACACCCAAAGCGATCGCAAACAGAATAAAGGCAAAAGGTCTTCAAAAACTTAGATGGTACTGCCAGATGTGCCAGAAACAGTGCAGGGATGAGAACGGATTCAAATGCCACTGTATGAGTGAAAGTCATCAACGCCAAATGCAAGTCTTTGGCCAAAACCCTAATCGCATCGTCGATGGTTACTCAGAAGAATTTGAAAGGGCTTTCATGGAGAATATGAAACGCAGCCACCGTTTCAGCCGAATAGCGGCCACAGTCGTTTACAATGAATACATTAACGATCGGCATCACATCCATATGAATTCAACACAGTGGGCTACTCTTACCGAGTTTGTGAAGCATTTGGGTCGAACAGGTCAGTGTAAAGTTGAAGAGACCCCAAAGGGTTGGTTTATTACTTATATAGATAGAGATTCAGAGACCCTTTTCAAAGAAAATTTGAAAAACAAGAGAATTCGAGCTGATTTAGCGGATGAAGAGAAGCAAGAAAGGGAGATAAAGAAGCAGATTGAGAGGGCCGAGCAGTTGATGCCGTTGGGTTCTGAGTCCACTCAGCCTTTGGATACTGAACAAGCTAAGGAGTTGAATTTGGAGAGGGGAGTTAAGATTGGTTTTGCACTTGGCTCATCTTCTAAAGTGAAGGAGAAGACGGAGAATTCAAAACTGGTTTTTGATGAGCCACAGAATGATGCAAATGAGAGAGGTAAAGTTGCAGGGAAGTCAAGCTCAAATGGGACGGATAATGGCCGGTCAGCTTTGGAGGAATTGATGAGAGAGGAAGAGAAGAAGAAGGAGAAGTTTAATAGGAAGGATTACTGGTTATGTGAGGGTATAATTGTGAAGGTAATGAGCAAGGCGTTGGCTGAGAAGGGGTACTACAAGCAAAAGGGAGTTGTGAGGAAAGTTATAGATAAATATGTAGGGGAGATAGAAATGCTCGATAGCAAGCATGTGCTTAGAGTCGACCAAGAAGAGCTCGAGACTGTGATCCCACAAATTGGGAGCCTTGTGAGGATTGTGAATGGGGCCTATCGTGGGTCGAATGCACGGCTTTTGGCTGTGGATATAGATAAGTTTTGTGCTAAGGTTCAGATTGAGAAGGGCGTTTATGATGGTAGGGTTATCAAGGCAGTTGAGTACGAGGATATCTGTAAAGTTGTCTAG 1185 43.46 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQVFGQNPNRIVDGYSEEFERAFMENMKRSHRFSRIAATVVYNEYINDRHHIHMNSTQWATLTEFVKHLGRTGQCKVEETPKGWFITYIDRDSETLFKENLKNKRIRADLADEEKQEREIKKQIERAEQLMPLGSESTQPLDTEQAKELNLERGVKIGFALGSSSKVKEKTENSKLVFDEPQNDANERGKVAGKSSSNGTDNGRSALEELMREEEKKKEKFNRKDYWLCEGIIVKVMSKALAEKGYYKQKGVVRKVIDKYVGEIEMLDSKHVLRVDQEELETVIPQIGSLVRIVNGAYRGSNARLLAVDIDKFCAKVQIEKGVYDGRVIKAVEYEDICKVV 394
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 2192395 2194432 - Conep18aG0046200.1 Cone18ag0450 457411
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0450 394 MobiDBLite consensus disorder prediction 224 240 - -
Cone18ag0450 394 MobiDBLite consensus disorder prediction 242 257 - -
Cone18ag0450 394 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Cone18ag0450 394 FunFam DNA/RNA-binding protein kin17-like 284 337 - -
Cone18ag0450 394 Gene3D - 60 159 IPR038254 -
Cone18ag0450 394 Gene3D - 284 337 - -
Cone18ag0450 394 CDD KOW_KIN17 340 393 IPR041995 -
Cone18ag0450 394 MobiDBLite consensus disorder prediction 224 257 - -
Cone18ag0450 394 Coils Coil 257 277 - -
Cone18ag0450 394 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 393 IPR037321 GO:0003690(PANTHER)|GO:0005634(PANTHER)|GO:0006260(PANTHER)|GO:0006974(PANTHER)
Cone18ag0450 394 SMART Kin17_mid_2 52 178 IPR019447 -
Cone18ag0450 394 Coils Coil 156 183 - -
Cone18ag0450 394 Pfam KN17 SH3-like C-terminal domain 276 329 IPR041330 -
Cone18ag0450 394 FunFam DNA/RNA-binding protein KIN17, putative 338 394 - -
Cone18ag0450 394 FunFam DNA/RNA-binding protein KIN17, putative 61 160 - -
Cone18ag0450 394 Gene3D - 338 394 IPR014722 -
Cone18ag0450 394 SUPERFAMILY beta-beta-alpha zinc fingers 26 62 IPR036236 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1130 Cone-Chr11:8728864 Cone18ag0450 Cone-Chr18:2192395 1.81E-256 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0450 K13102 - csv:101216499 645.966