Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone18ag0453 | ATGGACGATGAATTGAATACGATACAAAAGATATGCGATTATATCTTGGACTCCACAAATTCCTACTCGTTTGCAAAACTTGATGATCAGCAAGTGTATTCCCTTATGAGGCTTCGAGAAATATCGAATCGGGTTATTTACGGTCAAGATACAAGGGTGACAAAGAATGATGTAATTAATGAAATGTCTTTCATAATAAACAGGCTGGCAGGGGAGTGCAAGGATATAGTTGAACGTCTAAACCGAATTTCATATAAAGGCTTGGATAATCAGCAGTTGCAACATCTATTGAGGTTGAAAGAGATTTTATCCGGGATTGTGGAAGGTGCTAAAGATACAGAAGCTGAAACTTCTCTCACTAGTGAATATGTTGGTGGGGCCGACGCATGGATTACAGACAGCCTCGAGGAAGAGACAACAGGCTCAGGAAATGATGATTTAGAACTGACAGAGGTACAGAGCATGGAGGTTGAAGGTGAGCAGATATTAGTGCTTGAACATACAATTGAAAATGAGGAAGAAGAAGATCAAATATCTCATATTCTTCAGTCTGTGATTTGGCCACTGAATGGGTCTATAACTAGAGAATGGGTATTGGATATGATGCGGACCTTTGAACATTTTACCAAAGTCAACCCACCGTCAGATTTTCAAAATGTGATGCCAGCTGATGTGGTGGAGAATTTACTTGAGACAGTTGGGAATATTCTACATGAGGAACCAAACTGTGTGGAAATAGATTGTCTGGGTGATGACTCAAAAGTTGTTATTGTGGGTGATATTCATGGACACTATCATGATCTACTCCATCTCTTTCAACTTGCCAACTTCCCTTCTGAGAACCAGTTTTATGTCTTCAATGGTGATTATGTAGATAGAGGAGCCTGGGGTTTGGAGGTTTTTCTCGTCCTGTCAGCTTGGAAAGTATTGATGCCTAATAGAGTATATATACTAAGAGGAAGTCACGAGACGAGATATTGTACGTCTAGATACGGTTTTGAGAAGGAAGTAAGGACAAAATACGGGGAGGAAGGTGAAAAGGTCTATAACAGATGCTTGGGGACTTTCAAAGAACTTCCTTTGGCTTCCATTATAGCGAAAAAAGTATATACAACTCATGGAGGGATATTTCGAAATAGATGTACTACTCAGATGCAGGGCTCCAAGACGAGGAAAACACCAAAACTAAAAGTTAGTTGTTTAGAAGAACTTTTTGAGATCGAACGGTTTAATATAGATGCTCCAATGGAAGATGAAGACCCAAATGTTTTACTGGCCGATGTATTATGGTCAGACCCGTCAAACAGAGATGGTTTAAGGAAAAATAAAGATAGAGGCTCTGGTCTATTGTGGGGTCCGGCTTGCACTGAAGCCTTCTTAAAGCAGTCCAACTTAAAGTTGATGATAAGATCGCATGAAGGACCAGATGCAAGGGATGGTAGGGAAGATTTGGATGACATGTTAAGTGGGTATAGTGTAGATCATGAAGGAGAATCTGGGAAGCTATATACTCTCTTCAGTGCCCCTGACTACCCTCAGTTTAGTAAGAAGAGGTACAACAATAAAGGTGCATATGCTGTGTTGCAGGCTCCTAATTTTGATAGTCCTTCCTTCCACACATTTCAAGCGGTACATAGACCAAAGGTAGATGCTTATTATGTGAGTGGCGAGGAAGAAGACTGTGCCCTAGACTCGGCATTAGTGGCCTTGACAAATGGGAACTCTTCTAAAAAACCCTCCCCTGCCACAACAATTTATGGGGTTGATTTTGAAGCAGTAGGTATCTCGAGTCCACCGTCTTGGAATGTTAAGTTGACCGATGACTCAGCTGGTCCACAACTTCTTCGTGTCCCAAAGGCTCCGATCGTAGAAGGACTACCTTTACCCGCCAACTTGGAGGAGCCACACAGGGCTGCTTACGAGTACTTCTTGGAGCTCATTGCTGGCCTCAAGTTTCTTGTTCAAACAACGGAGAGTAGGAGCAAAACTGATTTTCCTCAACAGAAGAAGAAGTTCAATTAG | 2022 | 41.64 | MDDELNTIQKICDYILDSTNSYSFAKLDDQQVYSLMRLREISNRVIYGQDTRVTKNDVINEMSFIINRLAGECKDIVERLNRISYKGLDNQQLQHLLRLKEILSGIVEGAKDTEAETSLTSEYVGGADAWITDSLEEETTGSGNDDLELTEVQSMEVEGEQILVLEHTIENEEEEDQISHILQSVIWPLNGSITREWVLDMMRTFEHFTKVNPPSDFQNVMPADVVENLLETVGNILHEEPNCVEIDCLGDDSKVVIVGDIHGHYHDLLHLFQLANFPSENQFYVFNGDYVDRGAWGLEVFLVLSAWKVLMPNRVYILRGSHETRYCTSRYGFEKEVRTKYGEEGEKVYNRCLGTFKELPLASIIAKKVYTTHGGIFRNRCTTQMQGSKTRKTPKLKVSCLEELFEIERFNIDAPMEDEDPNVLLADVLWSDPSNRDGLRKNKDRGSGLLWGPACTEAFLKQSNLKLMIRSHEGPDARDGREDLDDMLSGYSVDHEGESGKLYTLFSAPDYPQFSKKRYNNKGAYAVLQAPNFDSPSFHTFQAVHRPKVDAYYVSGEEEDCALDSALVALTNGNSSKKPSPATTIYGVDFEAVGISSPPSWNVKLTDDSAGPQLLRVPKAPIVEGLPLPANLEEPHRAAYEYFLELIAGLKFLVQTTESRSKTDFPQQKKKFN | 673 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 2207524 | 2211376 | + | Conep18aG0046500.1 | Cone18ag0453 | 457414 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone18ag0453 | 673 | Gene3D | - | 154 | 559 | IPR029052 | - | |
| Cone18ag0453 | 673 | SMART | pp2a_7 | 221 | 545 | IPR006186 | GO:0016787(InterPro) | |
| Cone18ag0453 | 673 | Coils | Coil | 155 | 175 | - | - | |
| Cone18ag0453 | 673 | SUPERFAMILY | Metallo-dependent phosphatases | 212 | 549 | IPR029052 | - | |
| Cone18ag0453 | 673 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 148 | 555 | IPR051134 | - | |
| Cone18ag0453 | 673 | PRINTS | Serine/threonine phosphatase family signature | 284 | 311 | IPR006186 | GO:0016787(InterPro) | |
| Cone18ag0453 | 673 | PRINTS | Serine/threonine phosphatase family signature | 407 | 434 | IPR006186 | GO:0016787(InterPro) | |
| Cone18ag0453 | 673 | PRINTS | Serine/threonine phosphatase family signature | 254 | 281 | IPR006186 | GO:0016787(InterPro) | |
| Cone18ag0453 | 673 | PRINTS | Serine/threonine phosphatase family signature | 354 | 380 | IPR006186 | GO:0016787(InterPro) | |
| Cone18ag0453 | 673 | PRINTS | Serine/threonine phosphatase family signature | 501 | 517 | IPR006186 | GO:0016787(InterPro) | |
| Cone18ag0453 | 673 | PRINTS | Serine/threonine phosphatase family signature | 317 | 341 | IPR006186 | GO:0016787(InterPro) | |
| Cone18ag0453 | 673 | Pfam | Calcineurin-like phosphoesterase | 254 | 473 | IPR004843 | GO:0016787(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0888 | Cone-Chr12:7879112 | Cone18ag0453 | Cone-Chr18:2207524 | 7.83E-142 | dispersed | |
| Cone18ag0453 | Cone-Chr18:2207524 | Cone8ag0921 | Cone-Chr8:8891620 | 1.10E-138 | dispersed | |
| Cone1ag1287 | Cone-Chr1:56254101 | Cone18ag0453 | Cone-Chr18:2207524 | 7.87E-282 | wgd | |
| Cone11ag1125 | Cone-Chr11:8710754 | Cone18ag0453 | Cone-Chr18:2207524 | 0 | wgd | |
| Cone18ag0453 | Cone-Chr18:2207524 | Cone5ag0273 | Cone-Chr5:1156254 | 4.94E-278 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone18ag0453 | K04460 | - | csv:101211172 | 868.226 |