Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0463 ATGGATCGTCAGAAGCTGTATGACAAGCTGTACAAGGCAAAGCCATTTCTGAGTGTCATTCTTCTTCAGTTTGGTTATGCTGTTATGTTCATCGTCTTGAAGCTTGCTCTAAACAAAGGAATGAACCCTCGCATTCTCGTCGTTTATCGCCATGTCGTTGCATTTTGCGTCATTGCTCCGTTTGCCCTCATCTTCGACAGGAAAGTAAGGCCGAAGATGACTCTTCCAGTTTTTGCCAAGATTATGCTGCTGGGCTTACTGGAGCCTGTAATGGACCAGAACTTGTACTACATGGGAATGAAATATACAACAGCAACTTTCACGTCTGCTATGTGTAATATTCTTCCTGCCTTTGCATTTTTAATGGCTTGGGCTTGCAGGCTTGAGAAGGTAAATATAAGGAAAGTTCATAGCCAGGCAAAGATAATGGGAACCATAGTGACAGTAGGAGGAGCCATGCTTATGTCTCTGTTTAATGGTCCTGTCCTCAATTTGCCTTGGACAAAAAGAAACCTCCATTATCACTCTTCTACTTCTACTGCAACCAAGCAGGACCCCATCAAAGGCGCTCTCTTCATCGGCACTGGCTGTGTTTGCTGGTCTGCTTTCATCATTCTTCAGGCAATTGCTCTAAAAGCATACCCGGCAGAGCTTTCTTTAGCAGCATTGATATGCTTGATAGGTGCAATGGAAGGCAGTGTAGTAGCTGTAGCGATTGAATGGAGAAATCCTTCTGTCTGGTCACTTCACTTCGATTCCAAACTAGTAGCTATCATCTGCAGTGGAGTTATAGGTTCGGGTTTTGCCTATTACATTCAAGGAGTGGTTATGAAGCAAAAAGGACCTGTTTTTGTTACTGCCTTTAACCCTCTAAGCATGGTTATTGTTGCAATTCTGAGCTCCTTCATCTTGTCCGAAATTATGTACTTAGGAAGAGTAATTGGAGCAATTGTGATTGTAACTGGCCTGTACTTAGTGTTGTGGGGAAAGAGCAAGGATCAAATAGTACCCAAGTCAGGCATGGAGAGGGTGACGCCGTCGGAGAGAGAAATGACAATCACAAATGAGAGTGATAATGATACAATCAATGCTTCTGATAAAAGATCAGTGGTCATTGATATTGTTAAAGAACCAAAGAAAGAATTCAATTCTGGTTAA 1158 42.49 MDRQKLYDKLYKAKPFLSVILLQFGYAVMFIVLKLALNKGMNPRILVVYRHVVAFCVIAPFALIFDRKVRPKMTLPVFAKIMLLGLLEPVMDQNLYYMGMKYTTATFTSAMCNILPAFAFLMAWACRLEKVNIRKVHSQAKIMGTIVTVGGAMLMSLFNGPVLNLPWTKRNLHYHSSTSTATKQDPIKGALFIGTGCVCWSAFIILQAIALKAYPAELSLAALICLIGAMEGSVVAVAIEWRNPSVWSLHFDSKLVAIICSGVIGSGFAYYIQGVVMKQKGPVFVTAFNPLSMVIVAILSSFILSEIMYLGRVIGAIVIVTGLYLVLWGKSKDQIVPKSGMERVTPSEREMTITNESDNDTINASDKRSVVIDIVKEPKKEFNSG 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2241742 2243727 + Conep18aG0047600.1 Cone18ag0463 457424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0463 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 159 - -
Cone18ag0463 385 PANTHER WAT1-RELATED PROTEIN 19 347 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone18ag0463 385 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020(InterPro)
Cone18ag0463 385 Pfam EamA-like transporter family 17 155 IPR000620 GO:0016020(InterPro)
Cone18ag0463 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 332 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0463 Cone-Chr18:2241742 Cone7ag1542 Cone-Chr7:10639328 5.45E-121 dispersed
Cone10ag0293 Cone-Chr10:1389563 Cone18ag0463 Cone-Chr18:2241742 5.78E-130 wgd
Cone11ag1117 Cone-Chr11:8677300 Cone18ag0463 Cone-Chr18:2241742 7.70E-242 wgd
Cone13ag1320 Cone-Chr13:9780093 Cone18ag0463 Cone-Chr18:2241742 3.56E-132 wgd
Cone18ag0463 Cone-Chr18:2241742 Cone19ag1306 Cone-Chr19:8813105 2.34E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0463 - - - 0.0